Arenibacter algicola: AREALGSMS7_00162
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Entry
AREALGSMS7_00162 CDS
T04973
Name
(GenBank) excinuclease ABC subunit C
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aalg
Arenibacter algicola
Pathway
aalg03030
DNA replication
aalg03430
Mismatch repair
aalg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aalg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AREALGSMS7_00162
03430 Mismatch repair
AREALGSMS7_00162
03440 Homologous recombination
AREALGSMS7_00162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalg03032
]
AREALGSMS7_00162
03400 DNA repair and recombination proteins [BR:
aalg03400
]
AREALGSMS7_00162
Enzymes [BR:
aalg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AREALGSMS7_00162
DNA replication proteins [BR:
aalg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AREALGSMS7_00162
DNA repair and recombination proteins [BR:
aalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AREALGSMS7_00162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
GIY-YIG
RNase_H_2
DUF7508
DNA_pol_A_exo1
Rv2179c-like
PipA
Motif
Other DBs
NCBI-ProteinID:
ASO03660
UniProt:
A0A221UQW5
LinkDB
All DBs
Position
192260..193639
Genome browser
AA seq
459 aa
AA seq
DB search
MYTIIDIETTGNGIKGNKITEISIFKYDGYEIIDEYTSLVNPECEIPYFITGLTGIDNDL
VRNAPTWEEIASKVLEITQDTVFVAHSVNFDYNVIKNEFQNIGINFSRKKLCTVRLSRKL
IPGLNSYSLGKLCSSLNIPLTDRHRAKGDAQATVILFKKLLRTDGAEKVFKSFLNARSQE
ATLPPQLPKEIFERLPNSPGVYYFKDAKGAIIYVGKAIDIKKRVLGHFYDKANKEVLMCK
ATHDIDFELSGNELIALLMESAAIKQHFPLYNQSQKRTSTEYAIFSYEDRNGIQHLAYNK
LKLTPSPISTFNTITDCRLFLEELCKNYGLCPKFCHLQENISSCSHYNITNCSGICRGTE
SPMEYNAKVQNAIEALMDKNQNLVIKEKGRHTKEEAFVLVANNKYKGYGFLPRHEQINSI
DALENYLELQKENMDTKRILSWYLRKYPNKAIHFSPLSI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccatcattgatatagaaacaaccggaaacgggattaaaggaaataagattact
gaaatctccattttcaaatacgacggttatgaaattattgatgaatatacttccctggta
aaccctgaatgtgaaattccctactttattactggattgacggggatcgataatgattta
gtgcggaatgcccccacttgggaagaaatagcttcaaaggtattggaaataacgcaggac
accgtatttgtggcccatagcgtaaactttgactacaatgtcatcaaaaatgaatttcag
aatatcggaattaatttttcccgcaaaaaattatgtacggtacgattgtccagaaaactt
atccctggcctaaattcctatagtttgggaaaattatgcagctctttgaatattccctta
acggatcgccacagggcgaaaggggacgcccaggccacggtaattctgtttaaaaaactc
ttaaggacagatggtgctgaaaaggtatttaaatcctttctcaatgcacgctcacaggaa
gctaccttaccaccacaattgcccaaggaaatttttgaaagactgcccaattcacctggt
gtctattattttaaagacgcaaagggagcaataatatatgtaggtaaggccatcgacata
aaaaaacgggttcttggacatttttatgacaaggcaaacaaagaagttttaatgtgcaag
gccacgcacgacattgattttgaattatccgggaacgagcttattgcccttttaatggaa
tcggctgccattaaacaacatttccctttatacaatcaaagtcagaaacgcacttcaaca
gaatatgccattttttcctatgaagatcggaacggaatacaacacctggcgtacaacaaa
ttaaaattgacgcccagccccatatccacttttaataccataacggactgcaggttgttt
ttggaggaattatgtaaaaactacggtttatgtcctaaattctgtcatttacaggaaaat
attagcagctgctcccattataatattaccaattgcagcggaatatgcaggggaacggaa
tcgcccatggaatataatgccaaagtacaaaacgctattgaggcattaatggacaaaaac
caaaatttagtgatcaaggaaaagggtaggcacacaaaggaagaagcctttgtattggtg
gccaacaacaaatacaagggctatggattcttaccacggcacgagcaaataaatagtatt
gacgccctggaaaactatttagagctccaaaaagaaaatatggataccaaacggatcctg
tcatggtatttaagaaaataccctaacaaggccattcacttctctccactttctatttaa
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