Arenibacter algicola: AREALGSMS7_00295
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Entry
AREALGSMS7_00295 CDS
T04973
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aalg
Arenibacter algicola
Pathway
aalg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aalg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AREALGSMS7_00295 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalg03021
]
AREALGSMS7_00295 (rpoA)
03400 DNA repair and recombination proteins [BR:
aalg03400
]
AREALGSMS7_00295 (rpoA)
Enzymes [BR:
aalg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AREALGSMS7_00295 (rpoA)
Transcription machinery [BR:
aalg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AREALGSMS7_00295 (rpoA)
DNA repair and recombination proteins [BR:
aalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AREALGSMS7_00295 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
ASO03793
UniProt:
A0A221URB0
LinkDB
All DBs
Position
complement(343046..344038)
Genome browser
AA seq
330 aa
AA seq
DB search
MALLNFQKPDKVIMIDSSDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRID
KVEHEFSVISGVVEDVTEIILNLKQVRFKRQIDDVDSETVSISVSGKEQLTAGDFQKFIS
GYQVLNPDLVICNMDPKVSINMEITIDKGRGYVPAEENKKSNAPLGTIAVDSIFTPIKNV
KYSIENFRVEQKTDYEKLVFEIATDGSIHPKEALTEGAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLSFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattattaaattttcagaagcccgataaagttataatgattgattcctccgatttc
gaaggtaaattcgaatttcgtccattggaaccaggttatggcttaactgttgggaacgca
ttaagaagagttttgctttcgtccttggaaggttttgctatcacttctgttagaattgat
aaggtggaacatgagttctctgtaatttccggtgttgtggaagatgttaccgaaatcatt
ctaaatcttaaacaagttcgtttcaaaagacagatagacgatgttgatagtgagacagta
tctatctctgttagcggaaaggaacaattgactgcaggtgattttcaaaaatttatttct
ggttaccaagtattgaacccagatttagttatttgtaacatggatcccaaggttagcatt
aatatggagattaccatagataagggtagggggtatgtgcctgctgaggaaaataaaaaa
tccaatgcaccattaggtaccatagccgtagattctatctttactcctattaaaaatgta
aagtacagtatagaaaactttcgtgtagagcaaaagaccgattatgaaaaattggttttt
gaaatcgcaaccgatggttcaattcacccaaaagaggcattgaccgaaggagcaaaggtt
ctaatacaccactttatgttgttctccgatgagcgtattaccttagaggcagacgagatt
gcacagacggagacctatgatgaggaatcattgcatatgcgtcaactattgaaaaccaaa
ttggttgatatggatctttctgtaagagcattgaactgtttgaaagctgcggaagttgat
acacttggagatctggtttcttttaacaagaacgatttgatgaagtttagaaactttggt
aaaaaatccttgaccgaattggaagaattggttatcaacaaaggtttgagctttggaatg
gatttgtcaaaatataaattggataaagattaa
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