Arenibacter algicola: AREALGSMS7_00842
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Entry
AREALGSMS7_00842 CDS
T04973
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aalg
Arenibacter algicola
Brite
KEGG Orthology (KO) [BR:
aalg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aalg03016
]
AREALGSMS7_00842 (truB)
Enzymes [BR:
aalg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AREALGSMS7_00842 (truB)
Transfer RNA biogenesis [BR:
aalg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AREALGSMS7_00842 (truB)
Prokaryotic type
AREALGSMS7_00842 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASO04321
UniProt:
A0A221UTV3
LinkDB
All DBs
Position
984444..985139
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AA seq
231 aa
AA seq
DB search
MTKEDFLEGQVLLIDKPLGWSSFQAVNSLKWKIRKKFQLKKIKIGHAGTLDPLATGLLLI
CTGKATKTINELQGQEKEYTGTITLGGTTPSYDLETEINENFPIDHITNELIHSTTAQFI
GDIEQIPPVFSALKKDGKRLYEYAREGKEVEIKKRGVTITEFEITSIELPMVHFRVVCSK
GTYIRSLAHDFGKALQSGAHLSSLKRTKIGDYNVNKAITPEEFGKLLQIDS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaagactttttagaggggcaggtattattgatagacaaaccgcttggttgg
tcatctttccaagctgtcaattccttaaaatggaaaatcagaaagaaatttcaacttaaa
aaaattaagataggccatgccgggaccttggatccgttggcgaccggattattactcatc
tgtacaggaaaagccactaaaaccataaacgaactacaaggtcaggaaaaagaatatacg
ggaactattacccttggcggcacaactccgtcctatgatctggaaacggaaataaacgaa
aactttcccatagatcatattaccaatgaactgatccacagtaccactgcccaatttatt
ggggatatagaacaaattccacccgttttctcggctctaaaaaaagacggcaaaagactt
tacgagtacgccagggaaggtaaggaagtagagataaaaaaaagaggggtcaccatcaca
gaatttgaaattacctctatagaactgccaatggtacactttagggtggtctgcagtaaa
ggcacctatattagatctttggcacatgattttggaaaagcactacaatccggagcgcat
ttatcctcgttgaaaagaaccaaaataggggattacaacgtaaataaagccataaccccc
gaggaatttggtaaattactgcaaatcgacagttaa
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