Arenibacter algicola: AREALGSMS7_02531
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Entry
AREALGSMS7_02531 CDS
T04973
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aalg
Arenibacter algicola
Pathway
aalg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AREALGSMS7_02531 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalg03019
]
AREALGSMS7_02531 (pnp)
03016 Transfer RNA biogenesis [BR:
aalg03016
]
AREALGSMS7_02531 (pnp)
Enzymes [BR:
aalg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AREALGSMS7_02531 (pnp)
Messenger RNA biogenesis [BR:
aalg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AREALGSMS7_02531 (pnp)
Transfer RNA biogenesis [BR:
aalg03016
]
Prokaryotic type
tRNA degradation factors
AREALGSMS7_02531 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
ASO05974
UniProt:
A0A221UXA6
LinkDB
All DBs
Position
complement(2949710..2951929)
Genome browser
AA seq
739 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDEDVMPDAMAGLAASAAIQLSDFPFECAISEVRVGRIDGEFIINPTRAQLLVSDIDMVI
GASADSVMMVEGEMKEISEEEMVEAIKFAHDAIKVQCAAQLRLAEAFGRKEVREYEPERE
DEDLAKKIHDMAYDKVYAIAKAGSAKHERSAAFDAIKEEIKATFSEEELADFGDLVSRYY
YKAEKAAVRDLTLNDGLRLDGRKTDEIRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSREANQIDMPSFEGEETFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMVPE
DCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVQLKKPVSGIAMGLISDSDSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQAGAGRLHILSKL
VDTIAAPNADVKPHAPKMVTRVIPGEFIGALIGPGGKVIQELQKASKTTIVINEDPVTEE
GIVEILGTSQEGIDMVLAKIDSLLFKPEVGSAYEVKVIKMLDFGAVVEYTDAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYFGVDPRTRKEKVSRKALLPKPEGFKERPPREDRG
RNDRGNDRNRDRDRKPRRD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgataccaaaagtatttagagaggtcattgaccttggtgacggtagggaaatttctatc
gaaaccggaaaattggcaaaacaggcccatggttctgttgttgttcagtctggaaaatgt
atgttgttatgtacagtagtttccaattacaaacaaagtgatgtggatttccttccacta
acggtagattaccgtgaaaaatttgcagcttcaggtcgttacccaggaggtttcttcaag
agagaagcaagaccaagtgacggtgaagtattgactatgagattggtggatcgtgtttta
cgtccacttttccctaaggattaccatgctgaaacccaggtgatgatccaactaatgtcc
catgatgaggatgttatgccagatgctatggcgggattggccgcttctgcagctatccaa
ctttcagatttcccatttgaatgtgctatttcagaggtgcgtgttggtcgtattgatggt
gaattcataatcaatccaaccagggcccaattattggtatcggatatcgatatggtaatc
ggtgcttcagcagattctgttatgatggttgaaggtgaaatgaaggagatttccgaggag
gaaatggtggaagccattaaatttgcccatgatgccataaaggtacaatgtgctgcccaa
cttaggctggcagaagcatttggcagaaaagaagttcgtgaatacgagccagaaagggaa
gatgaggatttggccaagaaaatccacgacatggcttatgacaaagtttatgccattgca
aaagccggttcagcaaagcacgaaagaagtgcagcattcgacgccataaaagaagaaata
aaagctactttttctgaagaggaattggcagatttcggggatttggtttccagatactac
tacaaagctgaaaaagctgcggttagggatcttacattaaatgacggactacgtttggac
ggtagaaaaacagatgaaattagaccaatctggtgtgaagttgattatttaccatcaacc
cacggttccgcaatttttactcgtggagaaacccaagctttggcaacggttactttggga
acttcaagggaagccaaccaaatagacatgccatcgtttgaaggagaggaaactttctat
ctacattataacttccctccattctcaactggagaagcaagacctattagaggtacttcg
cgtagagaggttggacatggtaacttggcccaacgtgccttaaaaggtatggtccctgag
gattgtccttatacagtacgtgtggtatccgaggtattggaatccaacggttcgtcttcc
atggcaacggtctgtgccggaactatggcattgatggacgctggggtacaattaaagaaa
ccggtatccggtattgccatgggattgatttccgatagtgactcaggaaaatacgctgta
ttgtccgatatacttggtgatgaagatcatcttggggatatggactttaaagtaacagga
accgcagacggaatcaccgcttgccaaatggacattaaagtaaaggggttatcctatgaa
attttggtcaatgcattaaagcaggcaggggctggacgtttgcacatcctaagcaaattg
gtagataccattgcagcacctaatgccgatgttaaaccacatgcacctaagatggttacc
agggttatacctggcgaatttattggagcattgataggacctggaggaaaagtaatccaa
gaattacaaaaagcttccaaaacaactatcgttatcaatgaagatccggttaccgaagaa
ggtatagttgaaatattgggtacctcacaagaaggtattgatatggttcttgccaaaatc
gattcattattgtttaaaccagaggttggaagcgcttacgaagtgaaggtcatcaaaatg
ttggattttggtgccgttgtggaatataccgatgctcctggtaacgaagtattgcttcac
gtatccgaattggcctgggaaagaacagaaaatgtttccgatgtggtaaatatgggagat
gtttttgatgttaaatactttggtgtagacccaaggacaagaaaagaaaaagtttcacgt
aaggctttattgccaaaacctgaaggctttaaggaaagaccaccacgggaagatcgcggt
agaaatgacagaggcaacgatagaaatagagatagggatcgtaagccaagaagggactag
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