Arenibacter algicola: AREALGSMS7_02774
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Entry
AREALGSMS7_02774 CDS
T04973
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aalg
Arenibacter algicola
Pathway
aalg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AREALGSMS7_02774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalg03019
]
AREALGSMS7_02774
03400 DNA repair and recombination proteins [BR:
aalg03400
]
AREALGSMS7_02774
Enzymes [BR:
aalg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AREALGSMS7_02774
Messenger RNA biogenesis [BR:
aalg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AREALGSMS7_02774
DNA repair and recombination proteins [BR:
aalg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AREALGSMS7_02774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Peptidase_C36
SpoVIF
Motif
Other DBs
NCBI-ProteinID:
ASO06212
UniProt:
A0A221UY14
LinkDB
All DBs
Position
3229401..3231617
Genome browser
AA seq
738 aa
AA seq
DB search
MVKYGMGINETDLHASLKKYFGFSQFKGLQENVVKNIVQGKNTFVIMPTGGGKSLCYQLP
ALMQEGTAIVVSPLIALMKNQVDAIRDVSSEIGVAHVLNSSLTKTEIKQVKSDVSSGITK
LLYVAPESLTKEEYVDFLQGETISFVAVDEAHCISEWGHDFRPEYRNLKSIVGRLGDNIP
IIALTATATPKVQEDIIKNLGITDTKVFKASFNRPNLYYEVRPKTQNVDGDIIRFIKQNL
GKSGIIYCLSRKRVEELAQVLQVNGVSAVPYHAGLDGKTRSRHQDMFLMEDVDVVVATIA
FGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMSGK
PVAEQEIGNALLQEIVGYAETSMSRRKFILHYFGEEFDEINGDGADMDDNTRNPKEKQEA
KDDVVKLINVVMGTSEKFKSKEVVRTLVGKVNALISSHKTDEKEFFGIGRDKDKGYWMAL
IRQTLVAGLLRKEIEQYGILHVTPLGKEFVKNPTSFMMTMDHVYNKETDDAIVSAAKSSG
GVADDNLLKILKDLRKKEAHKLGVPPFVVFQDPSLEDMALKYPISLDELVNIYGVGEGKA
KKYGKPFVDQIAAYVEDNNILRPDDLIVKSTGANSSLKLYIIQNVDRKLPLDDIASAKGL
ELNELIKEMEQIVFSGTKLNIAYWIDEILDEDQQEEIHDYFLEANTDDLEVALKEFDGEY
EDEELRLYRLKFISEVAN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtacggtatgggtataaatgagactgatttacatgcctctctaaaaaaatat
tttggattctcccaattcaaaggtttacaggaaaatgttgttaagaatatagtacaaggt
aaaaatacctttgtaataatgcccactggaggtggaaaatccctttgttatcaattgcct
gcattgatgcaggaaggtacggcaatcgtggtatcgccattgatcgcccttatgaaaaat
caagtagatgctattagggacgtgtccagcgagataggtgtggcccatgttttgaactct
tctttgacgaagacagagattaagcaggtgaaaagtgatgtaagtagcgggataaccaag
cttttgtatgttgctcccgaatctttgaccaaggaggaatatgtagattttttgcaaggg
gaaactatttcctttgtggcggtggatgaggcccactgtatttcggaatggggacacgat
tttaggccggaataccgcaatcttaaatctatcgtaggtagattgggtgataacataccg
attattgccctaactgcaaccgcgacgcccaaggtacaggaagatattattaaaaatttg
ggaataaccgataccaaggtattcaaggcaagttttaatagaccaaatctttattacgaa
gtaaggcctaagacccaaaatgttgatggtgatatcattcgttttataaaacaaaatttg
ggcaaatcaggtattatttattgtcttagcaggaaacgggtagaggaactggcgcaggta
ttgcaggtaaacggagttagcgcggtaccttaccatgccggattggatggtaaaaccagg
tctaggcaccaggatatgttccttatggaggatgtagatgttgtagttgccacaattgca
tttgggatgggaattgataaaccggacgtgcgttttgtaattcaccacgatattcccaag
agtatagaaagctattatcaggagaccggtagggccggtagggatgggggagaaggacat
tgccttgctttctactcttacaaggatgtggaaaaattggaaaaattcatgtcgggcaag
cccgtggctgaacaggaaattggaaacgcccttttacaggaaattgtgggttatgccgaa
acttcaatgtcccgaagaaaatttatacttcattattttggagaggaattcgatgaaata
aacggggacggagccgatatggatgacaatacccgaaaccccaaggaaaagcaggaagcc
aaggacgatgtggttaaactgataaatgtagtaatggggaccagtgagaaatttaagtcc
aaggaggtggttaggaccttggtcgggaaggtaaatgccctgatatcctctcacaagacc
gatgaaaaggaattttttggcataggacgggataaggataagggctattggatggcgttg
atccggcagactttagtggcagggttgcttagaaaggaaatagagcaatacggcatttta
catgttaccccacttggaaaggaatttgttaaaaatcctacatcatttatgatgaccatg
gatcatgtttacaataaggagaccgatgatgccatagtaagcgccgccaaatcttcagga
ggcgtggccgatgataatttattgaagattctaaaagatttaagaaaaaaagaggcccat
aaattgggggttcctccttttgttgtttttcaagacccctccctagaagatatggccctc
aaatatccgatttctttggatgaattggtgaatatctatggagttggggaaggaaaggcc
aaaaaatatggcaagccctttgtggatcagattgccgcctatgtggaggataataacatt
ttacgacccgatgatctgatcgtaaaaagtacgggtgccaattcttcccttaagctttat
atcattcaaaacgtagatagaaaattgccgttggatgatatcgcttctgccaagggattg
gaactgaacgaattgatcaaggagatggaacaaattgtctttagtggtaccaaattaaat
atcgcttattggatagatgagattttggatgaggaccagcaggaagaaatccatgattac
ttcttggaagccaatacggatgatcttgaagtggccttaaaggaatttgatggggagtat
gaggatgaagagcttaggttgtaccggttgaagtttataagtgaggtggccaactaa
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