Arenibacter algicola: AREALGSMS7_03886
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Entry
AREALGSMS7_03886 CDS
T04973
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aalg
Arenibacter algicola
Pathway
aalg03420
Nucleotide excision repair
aalg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AREALGSMS7_03886
03430 Mismatch repair
AREALGSMS7_03886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalg03400
]
AREALGSMS7_03886
Enzymes [BR:
aalg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AREALGSMS7_03886
DNA repair and recombination proteins [BR:
aalg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AREALGSMS7_03886
MMR (mismatch excision repair)
Other MMR factors
AREALGSMS7_03886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASO07294
UniProt:
A0A221V124
LinkDB
All DBs
Position
4539368..4541689
Genome browser
AA seq
773 aa
AA seq
DB search
MENYINELNEAQKAPVLHKDGPLMVIAGAGSGKTRVLTYRIAYLMSQGVDSFNILALTFT
NKAAREMKKRIADIVGTSEAKNLWMGTFHSVFAKLLRFDGDKLGYPSNFTIYDTQDSQRL
LSAIIKEMGLDKDIYKYKQVQNRISSYKNSLITVKAYYNNPDLVEADAMAKRPRMGEIYQ
NYVDRCFKAGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LSDRFQNICVVGDDAQSIYSFRGANISNILNFQKDYDNVGMYRLEQNYRSTKNIVNAANS
IISKNTNQLEKVVWTSNDEGPLIKVHRSPTDAEEGRFVAGSIFENKMQSQMPNGNFAVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALKRIINFP
ARGIGQSTLDKLTVAANHYNRSIFEVIDNLERIDLKINSGTKRKLGDFVAMIKSFQIMNE
SADAFTLAEHVAKKSGVLLEFKKDGTPEGIGKMENIEELLNGIKDFVEGQKELADAKGDI
GEFLEDVALATDLDKDTGDDDRVALMTIHLAKGLEFPHVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQNRYRWGKLVDAEPSRFIEEIDEKYIENLTPVQRSG
YTPLIDVDIFGDVDKSRLRQNKPLQGTPPSGVRPNENQLRKLRKLKPELGTPVGNTNSVD
PNLSEGSLVNHTRFGRGQVLKIEGVGNDRKAEIKFDKGDIKKLLLRFAKLEVL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggagaattatattaacgaattaaatgaagcccaaaaggctcccgtattacataaggac
gggcctttgatggtgattgcaggggccggttccggtaagacaagggtattgacctaccgc
attgcttatttgatgagtcaaggagtggattcctttaacattttggctttgacctttacc
aacaaggcggctagggaaatgaagaaacgtattgccgatattgtgggtacctcggaagcc
aagaatctatggatgggtacttttcattccgtttttgcgaaacttttgcggttcgatgga
gacaaattgggctatccttccaatttcaccatatatgatacacaggattcccagcgtctt
ctatccgctatcattaaggaaatggggctggacaaggatatttataaatataagcaggta
caaaatagaatatcttcctataagaacagccttattaccgtaaaggcgtattacaataat
ccggatttggtagaggcggatgccatggccaagcgccctaggatgggagaaatttatcag
aactatgtggatcgctgctttaaggccggtgcaatggattttgatgatcttctgttgcgg
accaacgagctgcttacgagattccccgaagttctggccaagtatcaggacaggtttagg
tatattctagtagatgagtaccaggataccaaccattcccagtatttgatcgttaaggcg
ctatcggacaggttccagaatatttgcgtggtaggggatgatgcacagagtatatattcc
tttaggggggcaaacattagcaatattctaaattttcaaaaagattatgacaatgtgggg
atgtaccgattggaacagaactataggtccactaaaaatatcgtgaatgccgccaattcc
ataatttccaaaaacaccaatcaattggaaaaggtggtttggacctccaatgacgaaggt
ccattaattaaggttcaccgtagccctacagatgctgaggaaggtaggtttgtggccgga
tctatctttgaaaataaaatgcaaagtcagatgcccaatggtaatttcgccgttttatac
aggaccaactcacaatcacgggccatcgaagacgctcttagaaaaagggatatcccctat
aggatttatggcggactctccttttatcagcggaaagaaattaaggatgtgctgtcctat
ttaagattggttatcaatccaaaagatgaggaggcacttaaacgtattatcaatttccct
gcacgtggtattggacagagcactttggacaagcttaccgttgccgctaatcactataat
cgctcaatttttgaggttattgataacttggaaaggattgatttaaagatcaattccggt
accaaaagaaaattgggcgactttgtggccatgatcaaaagctttcagatcatgaacgaa
agtgcagatgcctttaccttggcagaacatgttgccaaaaaatccggagttctgctggaa
ttcaaaaaagacggtactccagagggaattggcaagatggagaatattgaagaattattg
aacggtatcaaggattttgttgaagggcaaaaggaattggcagatgccaaaggggatata
ggggagtttttggaggatgtagcactggcaaccgatctcgataaggatacgggtgatgat
gaccgagtggccttaatgaccattcacttggcaaagggactggaatttccgcatgtttat
attgtagggatggaagaagatctattcccctctgccatgagcatgaataccaggagtgaa
ttggaagaggaaaggcgtttgttttatgtggcccttaccagggcagaaaagcaggcatat
ttaacctatacgcagaatagataccgttggggtaaattggtagatgccgaacctagtaga
tttattgaggaaattgatgaaaaatatattgaaaacctcacacctgtccagagatctgga
tacacccccttaatagatgttgatatttttggcgatgttgataaaagcagattaagacag
aacaaacccctacagggaacacctcccagtggtgttaggcccaatgaaaatcagttgcga
aaacttcgtaaactaaaaccggaattaggtactcccgttggaaataccaattcggtagat
cccaatttatcagaaggttccctagtaaaccatactagatttggtaggggacaagtgcta
aaaattgaaggggtaggaaacgacaggaaagctgaaattaaatttgataagggagacata
aaaaaacttttgctaaggttcgcaaagttggaggtactctaa
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