Anopheles albimanus: 118456317
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Entry
118456317 CDS
T08930
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aali
Anopheles albimanus
Pathway
aali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118456317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aali03019
]
118456317
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118456317
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118456317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF2339
DUF5646
Motif
Other DBs
NCBI-GeneID:
118456317
NCBI-ProteinID:
XP_035772848
LinkDB
All DBs
Position
2:complement(55415608..55421643)
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AA seq
980 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMDPAQRE
KEEISSWLTSSINSLQIQIDQFECEIESLLAGKKKKLDKDKQDKMDELKGKLERHKFHVT
KLETLLRMLDNDGVEVEQIKKIKEDVEYYIDSSQEPDFEENEYIYDDIIGLDDVEISGIP
VSTGTDSNNSNETAGSPSSLISGTSPAQSPVLNYSASALHNHSSDLSADNNNLTDKRPKS
DGTKITPVKPTAIRASKVDPSVLAVSNVVNNNNGSGSSSLNTNSSSSGSGSTSSSIGSSN
GSNNNSSKPGLISSTPSKNHAITGPAPPNSISLNGPAFAAVAKQHANKNGSTIQPSGGVP
VVTSSSSSSVASTAGSGPLQAQAQNASNVFNLSQIINASQPKLSQQQQSQQGSLPSAASV
VATANTGNVQPSVQSITAPQQQQQQQQQQSQQQQATQQQQQQSQQQQATQQQQQQSQQIP
PGQNSMLIHGGQTLTSSSAASGTDSGNHVMSSASSAPAISNAGPNVINNCVSPSNSAVSS
RASPSLMSPPQQQQQQQQQQQQQQPQLQQQQQQQLLNGPTTLAQEVINRTGSLETGPSPN
PLMQQQQNQQGASAVAAAAAAAAAAAAAAQQQATAAAVAAAAAAAVAVAGQQQQQQQQQQ
SQQQPQPQPADTRQPGVPVPPNQSAQLQGPPQSYMVDGSGAGGVTGGLIPTSSATAITNG
PNTIINTNPSIASSASVNSGAGGGGGGTGLKVAGTHEACIPPLLGVAPLGTSKLQKEHQI
QFQRMEAAYYHLPTPSDSERLRPYLQRQPVQTPAHFPQQQLPHSDTVEFFQRLSPETLFF
VFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWG
QRKKEGFTFEYKYLEDRDLN
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcgaaagttgcaaggtgaaattgaccggtgcctgaagaaagtcactgaa
ggggtggaaacgttcgaagatatttggcagaaagttcacaatgctactaacagcaaccaa
aaggaaaagtatgaagcggatctcaagaaggaaattaaaaagctgcagcggttacgtgac
cagatcaaatcatggatcgcctccggcgagatcaaggataaaagcgctctgctggaaaac
cgtcggctcatagaaacccaaatggagcggtttaaggtagtcgagcgggaaacgaagacg
aaagcctactcgaaagaggggctcggagctgcccaaaagatggatccggcgcaacgagag
aaggaggagatcagcagctggctgacctcctccatcaactcgctgcagatccagatcgat
cagttcgagtgtgagatcgagtcactgttggcgggcaagaagaaaaagctcgacaaggac
aagcaggacaagatggacgagctgaaggggaagctggagaggcacaagttccacgtcacc
aaactggagacgctgctgcgcatgctggacaacgacggcgtcgaggtggaacagatcaag
aagatcaaggaagacgtcgagtactacatcgattcgtcacaagagcccgactttgaggag
aatgagtacatctacgatgatatcattggtttggatgatgtggaaatctctggcatcccg
gtgtcgacaggcacggatagcaacaacagcaacgaaacggccggctcgcccagcagctta
atatcgggaactagtccagcgcagtcaccggtgctcaactatagtgccagtgcgctgcat
aaccacagtagcgatctgtccgccgataataacaatctaacggataagcgtccgaagagc
gatggcacgaaaatcacgccggtgaaaccgacggctatccgcgccagcaaggtggatccg
tccgtactggcggtgagcaatgtcgtgaataacaacaacggcagtggcagcagtagcctc
aataccaacagcagcagtagcggcagtggtagcaccagcagtagcatcggtagcagcaac
ggaagtaataacaattcgtccaaacccgggctgatcagctcgacccccagcaaaaaccat
gcgatcactggtcccgcaccgcccaacagtatatcccttaacgggcctgcgtttgctgcg
gtcgcgaaacagcacgccaataaaaatggctccacgatccagccgagcggaggagtgcct
gtggtaacgtcatcatcgtcatcatcggtggcgtcaacggcgggaagtggaccgctgcaa
gcacaagctcagaatgcatcgaatgtcttcaacctcagtcagatcattaatgcatctcaa
cctaagcttagccagcagcaacagtcgcagcaaggaagcttgccgagtgcggcatcggta
gtcgccacagccaacaccggtaacgtgcagccgtcggtccaatcgataaccgcgccacaa
cagcagcaacagcagcagcagcagcaatcacaacagcagcaggcaacgcagcagcagcag
cagcaatcacaacagcagcaggcaacgcagcagcagcagcagcaatcccaacagattcct
cccggtcagaattccatgttaatacacggtggtcaaaccctaacatcgtcatcggcggct
agcggcaccgatagcggcaatcatgtaatgagcagcgcatcgtccgcgcccgcgatcagc
aatgctggtccgaacgttattaataactgtgtctcgccgagtaattccgcagttagcagc
agggcgtcaccaagtttgatgtcaccaccgcaacagcaacagcagcagcagcaacaacag
caacagcagcagccgcagttgcaacagcagcaacaacagcagctgttgaatggccctact
acactcgcgcaagaagtgataaatagaaccggaagtctcgaaacgggccctagccccaat
ccactaatgcagcaacagcagaatcaacaaggtgcatcagctgtcgccgcagcagcggcg
gcagcagcagcagcagcagctgcggcgcaacaacaagcaacggcagcagctgtagcagct
gccgcggcggctgcagtagccgttgcaggccaacagcagcagcagcagcaacagcagcaa
tcgcaacagcaaccacaaccacagccagcggacaccagacagcctggtgtaccagtgcca
ccgaatcaatccgctcaactgcaaggcccgccccaatcgtatatggtcgatggtagtgga
gccggtggtgtaacgggcggtcttataccgacgtcatcagctactgccatcaccaacggt
ccgaacacgatcatcaacacaaacccaagtattgcaagctctgccagtgtcaacagtggc
gccggtggtggtggtggtggtaccggcttaaaagtagccggtacgcacgaagcatgcatc
ccgccgctactaggcgttgcaccactcggtacatcgaagctacagaaagagcatcaaata
caattccaacggatggaagccgcttactatcatctgccaacaccgagtgactcggagagg
ctaaggccgtacttgcaacgtcaacctgtgcaaaccccagcgcactttccacagcaacaa
cttccacattctgatacggttgagtttttccagcgtctctcgccagagacgcttttcttc
gtgttttactacatggagggaaccaaggcccagtatctggccgcgaaggcgctgaagaag
cagagctggagatttcatacgaaatacatgatgtggttccagcgccacgaagaaccgaaa
gtgatcaacgaagagtacgagcagggaacctacatctattttgactatgaaaaatggggc
cagcgtaaaaaggaagggtttacgtttgaatacaagtacttagaagacagggacctgaat
tga
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