Anopheles albimanus: 118456331
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Entry
118456331 CDS
T08930
Name
(RefSeq) helicase SKI2W-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
aali
Anopheles albimanus
Pathway
aali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118456331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aali03019
]
118456331
Enzymes [BR:
aali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118456331
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118456331
mRNA degradation factors
3'-5' decay
Ski complex
118456331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_N
DEXQc_Suv3
ResIII
Helicase_C
MTR4_beta-barrel
MTR4-like_stalk
Spectrin_Anc-1
MSS51_C
ATPase_2
Motif
Other DBs
NCBI-GeneID:
118456331
NCBI-ProteinID:
XP_035772881
LinkDB
All DBs
Position
2:45192635..45196968
Genome browser
AA seq
1241 aa
AA seq
DB search
MQEPDVDVLRAFIVEPQIPLNDPKRFYQPRQPTLELLYEIPPAPIGSRIVANRCAEMGHL
LDFVEVTIADAGANAKNSMSLQREPVEGESARGSASYFPFWPGGFETPEAMLKTAASADG
ADSGDLLFDESSLKSCPPGFTNGIEFTKSGTSGGSSRSTVDGDTQTTGAVVDLLSAIEDE
EGFVLLAEETVDPGSSSTIQNEAQTEGKTGTPLVIGEGEEEELLATEGVQHRTAPILNIS
ANSGTNLQSAEWAEILDISKPVDDFYVKIPVMAHRFPFELDIFQKQAILKLEEHSHVFVA
AHTSAGKTVVAEYAIALSKKHLTKSIYTSPIKALSNQKYRDFKTTFQDVGLMTGDIQIEP
TASCLIMTTEILRSMLYCGSDITRDLEYVIFDEVHYITDSERGHVWEEVLILLPDHVCIV
MLSATVPNTLEFANWVGKTKQKRVYVVSTAKRPVPLEHYLYTGFGGKSKSDCFLIVNEHS
AFTHEGYRKAKECMEVKQTKASGGGGGGPVMRNQKRTGPYSQKQEQTLWVGLIHYLKSQD
KLPVVAFTLSRNRCDSNADALLSCDLTTAREKYAINSFFQLCLHRLIPPDRALPQVRQMQ
SCLERGIGIHHSGILPILKEIVEMLFARGLVKILFATETFAMGVNMPARTVIFDSTRKFD
GQSVRPLQPSEYTQMAGRAGRRGLDKTGTVIIICKNEVPAESELKTMILGKPVRLESQFR
LTYAMMLYLLRVELVTVENMMLHSFREFGKRQQLPQSKRELTKVQEKVSRLNKLGDHLQP
LCDFYHAAEEIIRLWNEIMPKQLCQPKALNELKPGRVLVISEKQHYNKLALLLAVSVQSQ
KDMKLTVLVLDHQQQSGTVSEVSGKDKDDTVDRIDRGTLWHRMLSLAIPYQSFIPEGVGG
HKILVLGPTNVVELTKQTIRCEAQKIIQNWETRQIPRFRDSPLSSSVIDAVASLSELQAM
LPDGNALGVFESIPLKMLFDHVELTRELQKAQSKLLQYQPYTNIANFEQEFALVYDRMQL
ERKLDDLKFQVSYESMSLYPDYCRKLEVLQDLKYIDDMHQVAMKGRVACEMGQNELMITE
LVMRNILTDLQPAEIAALLSSLVFQAKTDVSPKLTETLEKAVVQFREVENDIRSVERQHG
VMEVVKKEELNFGLVEVVYEWACNKPFAEIMMLTDIKEGIIVRCIQQLNETLCNVKDAAR
IIGDPVLHSKMEEASNAIKRDIVFAASLYTSSTPVVIVEAE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaccagacgtggatgtgttgcgggcgttcatagtcgagccgcagattccgctg
aatgatccgaagcggttctatcaaccacgccaaccgactctggagttgctgtacgagata
ccgcccgcaccaatcggcagccggatcgtagcgaatcgctgtgccgagatgggacacttg
ctggactttgtcgaggtcacgatcgcggatgcgggtgcgaatgcgaaaaactcgatgtcg
ctccagcgggaaccggtagagggagaatcggctcgtgggtccgcctcgtacttcccattt
tggccaggtggcttcgagacgcccgaggcaatgctcaaaactgccgcatctgcggacggc
gccgatagtggtgacctgctgttcgacgaaagcagcttgaaatcctgcccacccggtttc
acgaatggaatcgagtttacgaaaagtggcaccagtggcggtagcagccgcagcacggtg
gatggtgatacgcagactactggagctgtggtggaccttctgtcagcgatcgaggacgag
gaagggtttgtgctgttggcggaggaaaccgttgatccagggtcttctagcacgatacaa
aatgaggcccagacggagggtaagaccggcacgcctttagtgatcggcgaaggcgaagag
gaagagctgttggccacggaaggagtgcagcacaggacggcaccgattttaaacatttcc
gccaacagcggcactaacctgcagtcggccgaatgggccgaaatactggatatttcgaag
ccggtcgacgacttttacgtcaaaataccggtgatggcgcaccggtttccgttcgagctg
gacatcttccagaagcaggcgatactgaagctcgaagagcacagccacgtgtttgtggcg
gctcacacatccgccggcaagacggtggtagcggagtatgcgatcgccctgtcgaagaag
catctcaccaaaagcatctacacgtctccgatcaaggccttgtcgaatcaaaagtaccgt
gattttaagaccacgtttcaggatgtcggcctgatgacgggagacatccagatcgaaccg
accgcttcttgcttgatcatgacgacggaaatccttcgctcgatgctgtactgcggcagt
gacattacgcgcgatctcgagtacgtgatcttcgacgaggtgcactacattacggactcc
gagcggggccacgtgtgggaggaggtgctaattctgttgcccgatcacgtgtgcatcgtc
atgctgagtgccaccgtgcccaatacgctcgagtttgcgaactgggttggcaagacgaag
cagaagcgcgtgtacgtggtgagcaccgcgaaacggccagtgccactcgaacactatctc
tacacgggctttggcgggaagtcgaagagcgattgcttcctgatcgtgaacgaacacagt
gcgttcacgcacgaagggtaccggaaggccaaagagtgtatggaagtgaaacagaccaaa
gcatctggcggtggtggtggtggtccagtgatgcgaaatcagaagcgcacgggaccgtac
agccagaagcaggagcagacactctgggttgggttgatccattatttgaaaagccaggac
aagctaccggtggtggcgtttacgctgtcacggaatcgctgcgatagcaacgcggacgct
ctgctgtcctgtgatctgacgacggcccgggaaaagtacgccatcaattccttcttccag
ctttgcctacatcggctcattccacctgatcgtgcactcccccaggtacggcagatgcag
agctgtctcgagcggggtatcggcatccaccatagtggcattttaccgatcttgaaggag
atcgtcgagatgctgtttgcgcgcggactggtgaagatcctattcgctacggaaacgttt
gccatgggcgttaatatgccggctaggacggtcattttcgatagtacgcgcaagttcgac
gggcagtctgtgagaccgctgcaaccgtccgagtatacgcagatggcgggacgtgcgggt
cgccgtggattggacaaaaccggtacggtcattattatctgcaagaacgaggtaccggcc
gagagcgagctgaagacgatgatcctgggtaaaccggtgcggttagagtcacagttccgg
ctgacgtacgccatgatgctgtacctgttgcgcgtggagctggtgacggtcgagaacatg
atgctgcacagcttccgggagtttggtaagcggcagcagctgccacagagcaaacgggag
ctcaccaaggtacaggagaaggtatcgcggctcaataagctcggcgatcacctccaaccg
ctctgtgacttttaccacgcggcggaagagatcatacggttgtggaatgaaataatgccg
aaacaattgtgccaaccaaaggccttgaatgaactgaaaccgggacgcgtgctggtcata
agcgagaagcagcattacaacaagttggccctactgctggccgtttcggtgcagtctcag
aaagacatgaaactgacggtgctagtgctggatcatcagcaacagtcaggaacggttagc
gaggtgtcgggtaaggacaaggacgacacggtggaccggatagaccgcggtacactatgg
caccggatgctctcgcttgccataccgtatcaatccttcatcccggaaggcgtcggtggg
cataagattctcgtcctgggcccaacgaatgtggtggagctgacgaagcaaacgatccgc
tgcgaggcacagaagattatccaaaattgggaaacgcgacagataccaaggttccgggac
tcgccactgtcatcgtccgtcatcgatgccgtcgctagcttgagcgagctgcaggcaatg
ctaccggacgggaatgctctcggtgtgtttgaatcgatcccgctcaagatgttgttcgat
cacgttgagctaacccgggagctacagaaggcacaaagtaagctgttgcagtatcagccg
tatactaacattgccaactttgagcaagagtttgcgctcgtatacgatcgcatgcagctc
gagcggaagctggacgatctcaagtttcaggtgtcgtacgagagcatgtccctgtatccg
gattactgccggaaactagaggtacttcaggatcttaagtacatcgatgatatgcatcaa
gtggccatgaagggacgagtggcttgcgagatgggccagaacgagctgatgattacagag
ctagtgatgcgcaatattctgactgatctgcaaccggccgaaattgctgcccttttatct
agtctggtgtttcaggccaaaacggacgtttcaccgaagcttacggaaacgctcgagaag
gcggtagtgcagttccgggaggtggagaatgatatccgttcggtcgaacggcagcacggt
gtaatggaggtggtgaagaaggaagagctcaactttggccttgtcgaggtcgtgtacgag
tgggcctgcaataaaccgtttgcggagattatgatgctcacggacatcaaggagggtatc
atcgtacggtgcattcagcagctgaatgaaacgctctgcaacgtgaaggatgcggcacgc
atcatcggtgatccggtgctgcacagcaagatggaggaagcgtcgaatgcgataaagcgg
gacattgtgtttgctgccagtttgtatacctccagcacaccagtcgttatcgtcgaagct
gagtag
DBGET
integrated database retrieval system
