Anopheles albimanus: 118460435
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Entry
118460435 CDS
T08930
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
aali
Anopheles albimanus
Pathway
aali03020
RNA polymerase
aali03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118460435
09124 Replication and repair
03420 Nucleotide excision repair
118460435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aali03021
]
118460435
03400 DNA repair and recombination proteins [BR:
aali03400
]
118460435
Enzymes [BR:
aali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118460435
Transcription machinery [BR:
aali03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118460435
DNA repair and recombination proteins [BR:
aali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118460435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
118460435
NCBI-ProteinID:
XP_035780620
UniProt:
A0A182FN74
LinkDB
All DBs
Position
2:complement(53409272..53415931)
Genome browser
AA seq
1880 aa
AA seq
DB search
MSSDSKAPLRTVKRVQFGILSPDEIRRMSVTEGGIQFAETMEGGRPKLCGLMDPRQGVIE
RTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPTNPKI
KEIVMKSKGQPRKRLAYVYDLCKGKKICEGGEDMDLTKDGGVADPSKKQGHGGCGHYQPS
IRRTGLDLMAEWKEVNDENQEKKMQVSAERVYEILKHITDEECYVLGMDPKFARPDWMII
TVLPVPPLAVRPAVVMFGATKNQDDLTHKLSDIIKANNELKKNEQTGAAAHVIAENIKML
QFHVATLVDNDMPGMPKAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPD
PNLRIDQVGVPRSVAQNMTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDLR
FHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTS
PYNADFDGDEMNLHVPQSMETRAEIENIHITPRQIITPQANKPVMGIVQDTLTAVRKMTK
RDVFIEKEQMMNLLMFLPTWDGKMPQPCILKPKPLWTGKQIFTLIIPGNVNMIRTHSTHP
DEEDDGPYKWISPGDTKVMVEHGELIMGILCKKTLGTSAGSLLHIVFLELGHEIAGRFYG
NIQTVVNNWLLLEGHSIGIGDTIADPQTYAEIQRAIRKAKEDVIGVIQKAHNMELEPTPG
NTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQ
QNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFYFHAMGGREGLIDT
AVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQNLPTIK
LSNKVFEKRYRFDPTNERTLRRIFNEDVIKELTESASVIQEIEAEYEQLMRDREALRQIF
PNGDSKVVLPCNLQRMIWNVQKIFHINKRSPTDLSPLKVIQGVRDLLQRCVIVAGTDRLS
KQANENATLLFQCLVRSTLCTKYVAEEFRLNNEAFEWLIGEIETRFQQAQVNPGEMVGAL
AAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFLTGGAARD
AEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVIAEDQEFVNVYYEMPDFDPTRISPW
LLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNEDNKFQE
NEEENVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRIVITPEGEFKP
IGEWLLETDGTSMMKVLSERDVDPVRTYSNDICEIFSVLGIEAVRKSVEKEMNNVLQFYG
LYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLNDAAAHAEVDP
MRGVSENIILGQLPRMGTGCFDLLLDAEKCKLGMEIPHTSIMGATGMFFGSAATPSMTPW
QQSATPGYGGWSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPY
PPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPCYSPPSPQYSPGSSNYSPSSPNIHP
ATQKYSPTSPSYSPMSPMHPTSASNYASPAYSPTSPSYSPTSPSYSPSSPVFSPTSPSYS
PSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSP
KYSPTSPSYSPTSPSYIGSPHYTPASPQYAQSSPNYSPTSPSYSPSSPQHSPGSSSGSNH
YSLGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPS
SPASPTYSPTSPSYDDSNED
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgattcgaaggcaccgttgcggacggtgaagcgggtgcagttcgggattctc
tcgccggacgaaatccgccgcatgtccgtcacggaggggggcatccagtttgcggagacg
atggagggtggccgaccgaagctgtgcggtttgatggatccacggcagggtgtgatcgag
cggacgtcgcgctgtcagacgtgcgccggcaatatgaccgaatgtccgggccacttcgga
cacatcgatctcgcgaaaccggtgtttcatatcgggttcatcacgaagacgattaaaatc
ctgcgctgcgtttgcttctactgctccaagatgctggtgtcgccgaccaatccgaagatc
aaggagatcgtgatgaaatccaaggggcagccgcgcaaacgtctggcgtacgtgtacgat
ctgtgcaagggcaaaaagatctgcgaaggtggcgaggacatggacctcaccaaggacggt
ggcgttgcggatccgagcaagaagcagggccacggtggttgcggtcactaccagccctcg
attcggcgcaccggtttagatctgatggccgaatggaaggaggtgaacgacgagaaccag
gagaagaagatgcaggtgtctgccgagcgagtgtacgagattctcaagcacatcaccgac
gaagagtgctacgtgctcggtatggatccgaagtttgcccgtcccgattggatgatcatt
acggtgctaccggtaccaccgcttgccgtccgcccggccgtagtcatgttcggtgcgacg
aagaatcaggacgatttgacgcacaagctctccgacatcatcaaggcgaacaatgagctg
aagaagaacgaacagaccggtgcggcggcacacgtgattgcggagaacatcaagatgctc
cagtttcacgtagcaacgctcgttgacaacgacatgcccggtatgccgaaggcgatgcag
aaaagcggcaaaccgctgaaagccatcaaagcccgactgaagggtaaggaaggtcgtatc
cgtggtaatctgatgggtaagcgtgtcgacttttcggcccgtaccgtcatcacaccggat
ccgaacctgcgaatcgatcaagtaggcgtaccgcgctcggtcgcccagaacatgacgttt
cccgagctcgtcactccgttcaatatcgatcgcatgcaggagctggtccggcgcggcaac
tcccagtacccgggtgccaagtacatcgtgcgggacaatggcgagcggatcgatttgcgc
tttcacccgaaatcctccgatctgcatctgcagtgtggctacaaggtcgagcggcatcta
cgggacgacgatctggtgatcttcaaccgtcagccgacgctgcacaagatgagtatgatg
gggcatcgggtgaaggtgttgccgtggtccacgttccggatgaacctcagctgtacctca
ccgtacaatgccgatttcgacggggacgagatgaacctgcacgtgccacagtcgatggag
acgcgggcggagatcgagaacattcacattacgccgcgccagatcattacgccgcaggcg
aacaaaccggtcatgggtatcgtgcaggacacgctgacggcggtccgaaagatgacgaag
cgcgatgtgttcatcgagaaggagcagatgatgaacctgctgatgttcctgccgacctgg
gacggcaagatgccgcaaccgtgcatccttaagccgaagcccctgtggacgggtaagcaa
atctttacgctcatcattcccggcaacgtgaacatgatccgcacgcactcgacccacccg
gacgaggaggatgacggaccgtacaaatggatttcgcccggtgacacgaaggttatggta
gagcacggcgagctgatcatgggcattctgtgcaagaaaacgctcggtacctcggccggt
tcgctgctgcatatcgtgtttctcgagctgggtcacgagattgccggtcggttctatggt
aacatccagacggtcgtcaacaattggctgctgctggagggtcacagtatcggtatcggc
gacacgattgccgatccgcagacgtacgccgaaatccagcgcgccatccgcaaggccaag
gaggacgtgataggcgtgatccagaaggcgcacaatatggaactggaaccgacacccggt
aacacgctgcggcagacattcgagaaccaggtgaaccgtatcctgaacgatgcccgtgac
aagaccggcggttcggccaagaagtccctgacggagtacaacaatctgaaggcgatggtg
gtgtccggttcgaagggttccaacattaacatctcccaggtcattgcctgcgtggggcag
cagaacgtcgagggaaagcgtattccgttcgggttccgcaagcgcaccctgccgcacttc
atcaaggacgattacggtccggagtcgcgtggtttcgtggaaaactcgtacctggccggg
ctaacgccgaccgagttttacttccacgccatgggcggtcgcgagggtttgattgatacg
gccgtcaagacggcggaaaccggttacatccagcgtcggctgatcaaggccatggagtcg
gtcatggtgaactacgacggtacggtgcgtaactcggtcggccagctgattcagctgcgg
tacggtgaggacggactgtgcggtgaagcggtcgagtttcagaatcttccgacgatcaag
ctgtcgaacaaggtgttcgagaagcggtaccgcttcgatccgaccaacgagcgcacgctg
cgccgtatcttcaacgaggacgtgatcaaggagctgacggaatcggcctcggtcatccag
gagattgaggccgagtacgagcagctgatgcgcgatcgggaagcgctgcgccagatattc
ccgaacggtgactcgaaggtagtcctgccgtgtaacctgcagcgcatgatctggaacgtg
cagaagatcttccacattaacaagcgctcaccgacggatctgtcgccgctgaaggtcatc
cagggtgtgcgggatctgctgcaacggtgcgtgatcgtggccggaacggatcggctgtcg
aagcaggccaacgaaaacgcaacgctgctgttccagtgcttggtccggtcgacgctctgc
accaagtacgtggcggaagagttccggctgaacaacgaggcgttcgagtggttgatcggt
gaaatcgagacacggttccagcaggcgcaggtcaatccgggcgagatggtcggtgccctg
gcggcccagtcgctcggtgagcccgccacccagatgacgctcaacacgttccactttgcc
ggtgtctcgtcgaagaacgtaacgctcggtgtgccgcggttgaaggaaatcatcaacatc
tccaagcgaccgaaggcaccgtccctgacggtgttccttaccggtggtgcggcccgtgat
gcggagaaggcgaagaatgtgctctgccggctcgagcacacgaccctgcgcaaggtgacg
gccaacacggcgatctactacgatccggatccgcagcggacggtcatcgcggaggatcag
gagtttgtgaacgtgtactacgagatgccggactttgatccgacgcgcatctcgccctgg
ctcctgcgtatcgagctcgatcggaagcgcatgacggacaagaagctgacgatggagcaa
atcgcggagaagatcaatgccgggttcggtgacgatctgaactgtatcttcaacgatgac
aacgccgacaagctggtgctgcgcatccgcatcatgaacgaggacaacaagttccaggag
aacgaggaagagaacgtggacaagatggaggacgatatgttcctgcggtgcatcgaggcg
aacatgctgtccgacatgacgctccagggtatcgaggcgatcggcaaggtgtacatgcat
ctgccgcagacggacgcgaagaagcgcatcgtcatcacgcccgagggcgagtttaagccg
atcggtgagtggctgctggaaacggacggtacctcgatgatgaaggtgctgagtgaacgg
gacgtcgatccggtgcgcacgtacagtaacgatatctgcgagatcttctccgtgctcggt
atcgaggcggtgcgaaagtcggtggagaaggagatgaacaatgtgctgcagttctacggt
ctgtacgtgaactatcgccacctggcgctgctgtgcgacgtgatgacggccaagggccat
ctgatggcgatcactcggcacggtatcaaccggcaggatacgggcgcgctgatgcgctgc
tcgttcgaggaaacggtagacgtgctgaacgatgcggccgcccatgcggaggtcgatccg
atgaggggcgtctcggagaacatcattctcggccagctgccacggatgggcaccggttgc
ttcgatctgctgcttgacgcggaaaagtgcaaactcggaatggagatcccgcacacttcg
atcatgggcgctacgggaatgttcttcggatcggccgccacaccgagcatgacaccgtgg
caacagtcggccacacccggctacggtggatggtccccgtcgggaccggccagtggtatg
acgccgggagggcccagcttctcaccgtcggcccaatcggacgcctcgggtatgtcaccg
tcctcctggtcgccgattcgtggttcgccgagttcgcccggtccttcgatgtcaccgtat
cctccgtcgtcgccgtcgatgtcaccgtcctactcgccgagcagtccgaactacgcgccc
aactcacccggaggtgcctcaccatcctactcaccgaccagtccgtgctattcaccgccg
agtccacagtactcgcccggaagctccaactattcaccgagcagcccgaacatccatccg
gcgacccagaagtactcgcctacctcaccgagctactcgcccatgtcaccgatgcatccg
acgagtgcctccaactacgccagtccggcctactccccgacgagtccctcgtactcgccc
acttcacccagctactctccttcatcgcccgtcttctcacccaccagtccctcctactca
ccctccagtccgtcatactcgcctacctctccgagctactcccccaccagcccctcgtac
tcgcctacgtcgccgaactttacgcccgtcacaccgtcctactcgccaagcagtcccaac
tattcgcccacttcaccgcactactcaccggcctcaccgagctactcgccctcctcgccg
aagtactcgcctaccagcccctcgtactcaccgacatccccgtcgtacattggtagcccg
cactacacaccggccagcccgcagtacgcgcagtcgagcccgaactattcgccgaccagc
ccatcgtactcgccgagctcaccgcagcattcaccgggtagcagtagcggcagcaaccat
tacagcctcggctcgtcctcgtactctcagacaccggcgccatattcgccgaacatgtcc
tcgtactcgccgagcagccccaagtactcgcccaccagccccgtctacacgtccagctca
ccgacctactctccctcgtcgccggcctactcacccacaccgcaaggctacagtccttcc
agcccggccagtccaacctactcacccacgagcccttcatatgacgatagcaatgaggat
tga
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integrated database retrieval system
