Anopheles albimanus: 118460968
Help
Entry
118460968 CDS
T08930
Name
(RefSeq) exosome RNA helicase MTR4-like
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
aali
Anopheles albimanus
Pathway
aali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118460968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aali03019
]
118460968
03041 Spliceosome [BR:
aali03041
]
118460968
03009 Ribosome biogenesis [BR:
aali03009
]
118460968
03016 Transfer RNA biogenesis [BR:
aali03016
]
118460968
Enzymes [BR:
aali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118460968
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
118460968
Spliceosome [BR:
aali03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118460968
Complex C
U4/U6.U5 tri-SnRNP related factors
118460968
Ribosome biogenesis [BR:
aali03009
]
Eukaryotic type
Pre-60S particles
Helicases
118460968
Transfer RNA biogenesis [BR:
aali03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
118460968
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
Death_3
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
118460968
NCBI-ProteinID:
XP_035781673
UniProt:
A0A182F1L5
LinkDB
All DBs
Position
2
Genome browser
AA seq
1044 aa
AA seq
DB search
MESVDDLFNVFKEGTEDDDVVEGPVLSEESKPEQPAPVVVIDDDDAESAGPSKEQTTAKK
RELPPEADSIDEAEVLAKRLKVESLLDEINLDNIESRIMVHTIQSPDACTHEVAVYPDQD
YVPLTAATGPPAKEYPFVLDPFQREAILCIENSQSVLVSAHTSAGKTVVAEYAIAKSLAD
KQRVIYTTPIKALSNQKYREFHEEFKDVGLVTGDVTINPTASCLIMTTEILRNMLYRGSE
IMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCHLHK
QPCHVVYTDYRPTPLQHYLFPVGGDGIHLVVDEKGQFKEDNFNTAMNVLQSAGEAAKGDQ
KGRKGGLKATSSSGETNIFKIVKMIMERNFAPVIIFSFSKKDCEVYAMQMAKLDFNSTVE
KKLVDEVFNNAMDVLTEEDRQLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLI
KALFATETFAMGLNMPARTVLFTSPRKFDGKDFRWVTSGEYIQMSGRAGRRGLDDKGIVI
LMIDEAVSPAVGKEIVQGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQS
SIPDIYMRVQEKQQKLQSIYIKEEQSIASYHHIREQLDTLGKQFREYITRPVYLVPFLQP
GRMVKIESDIGEFEWGIIVNFKKENANSKQNPLKTEQKVVIDVLLHVADGFEREGIPKPC
PAGKRGSVEVVPVLHKLVSRISSLRVYCPNDLRPSDNRRSVLKTIEEVKKRFPQGPPLLN
PIDDMHIKEKEFQGIVDMIDKFEKRLFAHPLHEAPELTRLYSKYMEKLELEKELKSEKSA
LREARSLLHMSELKHRKRVLRRLGYCTAADVIEFKGRVACELSCADELLITEMVFNGTFT
DLGPAQSCALLSCFVCDEKSNEVPSSAEELSGPLRQMQDLARRIAKVSNECKVELDEERY
VESFKPFLMDVVLAWCKGASFADLCKMTDIFEGSIIRCMRRLEELLRQMVQASKTIGNTD
LENKFSEAIRLLKRDIVFAASLYL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgtggacgatctgtttaatgtgtttaaggaagggactgaggacgacgatgtg
gtcgaggggccggttttgtccgaggaaagcaagccggagcagccggctccggtggtggtg
attgacgacgatgatgccgaaagcgccggccccagcaaagagcagacgacggccaagaaa
cgggaactgccgccggaggcggattcgatagacgaagcggaagttttggcgaaaagactg
aaggtagaatcgctgttggatgaaatcaacttggacaatattgagagccgcatcatggtg
cacacgatacagtcgccggatgcgtgcacgcacgaggtggccgtctacccggatcaggac
tacgtgccgttgaccgcggccacgggcccaccggccaaggagtacccgttcgtgctggat
ccgttccagcgcgaggcgatcctgtgcatcgagaacagccagtcggtgctggtgtcggcg
cacacgtccgccggtaagacggtggtggcggagtacgcgatcgccaagtcgctggcggac
aagcagcgcgtcatctacacgaccccgatcaaggcgctgtcgaatcaaaagtaccgcgag
ttccacgaagagttcaaggatgtgggcttggtgacgggcgatgtcacgattaacccgacc
gcctcctgcttgatcatgacgacggagatcctgcggaacatgctgtatcgagggtcggag
ataatgcgcgaggtcggttgggtgatcttcgacgagatccactacatgcgcgacaaggag
cgcggggtggtgtgggaggaaacgctgatcctgctgccggacaacgtgcactacgtgttc
ctgtcggccaccatcccgaacgcgcgccagttcgccgagtgggtgtgccatctgcacaag
caaccgtgccacgtcgtgtacacggactaccggccgacgccgctccagcactacctcttc
ccggtcggcggcgacggtatccatctggtggtggacgagaagggccagtttaaggaggat
aacttcaacaccgccatgaacgtgctgcagagcgcgggtgaggcggctaagggtgaccag
aagggccgcaaggggggcctgaaggcgacatcgagttcgggcgaaacgaacatcttcaag
atcgtgaagatgatcatggagcgcaactttgcgccggtgatcatcttctcgttcagcaag
aaggactgcgaggtgtacgcgatgcagatggccaagctcgacttcaactcgaccgtcgag
aagaagctggtggacgaggtgttcaacaatgcgatggatgtgctgacggaggaggaccgg
cagctgccgcaggtcgagaatgtgttgccgttgctgcgtcgtggcatcggtatccatcac
ggtgggctgctgccgatactgaaggaaacgatcgagatcctgttcggcgagggtcttatc
aaggccctgttcgccacggaaacgttcgccatgggcttgaacatgccggcccgcacggta
ctgtttacgagcccgcgcaagttcgacgggaaggacttccggtgggttacgtcgggcgag
tacattcagatgtcgggccgggccggtcgccgagggctggacgacaagggtatcgtcata
ctgatgatcgacgaagcggtatcgccggccgttggcaaggagatcgtgcaggggaaagcg
gatcccatcaattcggccttccatctgacgtacaacatggtactgaatctgctgcgcgtc
gaagagatcaacccggagtatatgctcgagcggtcgttctttcagttccaaaaccaatcc
tcgatccccgatatctacatgcgggtgcaggagaagcaacagaagctgcaatcgatctat
atcaaggaggagcaatcgatcgcgtcctaccaccacatccgcgagcagctggatacgctc
gggaagcagttccgggagtacattacgcggccggtgtacctggtgccgttcctgcaaccg
gggcgtatggtcaagatcgagtccgatatcggcgagttcgagtggggcattatcgtgaac
tttaagaaggaaaacgccaatagcaagcagaacccactgaagacggagcagaaggtggtg
atcgatgtgctgctgcacgtggccgatgggttcgagcgcgagggcatcccgaaaccgtgc
ccagcgggcaagcgcggctcggtcgaagtggtgcccgtgctgcacaagctcgtctctcgc
atcagctcgctgcgcgtctactgtccgaacgatttgcgcccctccgataaccgccgatcg
gtgctgaagacgatcgaggaggtgaagaagcggttcccgcaggggccaccgctgctcaac
ccgatcgatgatatgcacatcaaggagaaggagttccaggggatcgtggatatgatcgac
aagttcgagaagcgcctctttgcccacccgctgcacgaagccccggaattgacgcgcctg
tacagcaagtacatggaaaagctcgagctcgagaaggagctgaagagcgagaagagcgcc
ctgcgagaagcgcgcagcttgctgcatatgagcgagctgaagcaccggaagcgggtgctg
cggcgtctggggtactgtacggccgccgatgtgatcgagttcaagggccgggtcgcctgt
gagctgagctgcgccgacgagctgctcatcacggagatggtgttcaatggtacgttcacc
gacctcggcccagcccaatcttgtgccctgctcagctgcttcgtgtgcgacgagaagagc
aacgaggtgccgtcgtcggcggaggaactgtcgggaccgttgcgccagatgcaggatctg
gcccgccggatagcgaaggtgtcgaacgagtgcaaggtggagctggacgaggagcgttac
gtcgagtcgttcaaaccgttcctgatggatgtcgtgctggcctggtgcaagggtgcttcc
tttgcggatctttgcaaaatgacggacatcttcgagggttcgatcatccggtgtatgcgc
cggctcgaggaactgttgcgccagatggtgcaagcctccaagacgatcggcaacaccgac
ctggagaacaagttctccgaagcgattcgattgctgaagcgcgacattgtctttgcggcg
tcgctgtatctgtaa
DBGET
integrated database retrieval system
