Anopheles albimanus: 118465259
Help
Entry
118465259 CDS
T08930
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aali
Anopheles albimanus
Pathway
aali03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118465259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aali03019
]
118465259
03041 Spliceosome [BR:
aali03041
]
118465259
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118465259
Spliceosome [BR:
aali03041
]
Complex B
Other components
Prp19-related factors
118465259
Complex C
118465259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_2
TPR_12
TPR_10
Mad3_BUB1_I
ARM_TT21_C
TPR_15
ARM_TT21
NRDE-2
PPR
HTH_psq
SNAP
Motif
Other DBs
NCBI-GeneID:
118465259
NCBI-ProteinID:
XP_035789173
UniProt:
A0A182FBA0
LinkDB
All DBs
Position
3:complement(713487..716382)
Genome browser
AA seq
868 aa
AA seq
DB search
MPIAAEVNLAEVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPRFIINTVFERALKE
LPGSYKLWYNYLKTLRKQVKGKCITDGEYEEVNNAFERSLVFMHKMPRIWMDYCAFMTSQ
CKITRTRQVFDRALRALPITQHHRIWPLYLEFLKRFDIPETAVRVWRRYLKMCPEDAEEY
VEFLVSIGHLDEAAQQLASIVDNENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDGI
IRGGLRRYTDQLGHLWNSLAGYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMEDLERNPNPTEDDEIDVELRMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVAFAKFYEANHQLDDARIVFEKAV
QVDYLKVDELAGVWCEWAEMEIRQEQYEQALRIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFKTCKQVYDRIIDLKICTPQIIINYGMFLEEHNYFEEAFKAYE
KGISLFKWPNVYDIWNTYLTKFLARYGGQKLERARDLFEQCLDGCPPELAKNLYLLYAKL
EEEHGLARHAMAVYERATTGVKEDEMYAMSNLYIKKAADIYGIPRTRQIYEKAIEVLPEG
DSRKMCVLFAEMETKLGEIDRARAIYAHCSQMCDPRVTADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSAALINAAVTSGEPPKDAMRALEVKAAETTARAIAAVGATG
GNIMFVRGETQGGSAKEDRVVNPDEIDIDDDEDDDDEEAGGEGDEAGEEEDIRKKVPIER
QSIPAKVFGSLRPQQDDDDDDDTEANGH
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcagcggaagtgaatctggccgaggtgttcttcaacgaggaagatctgccg
tatgaagaggagatcctgcgcaatgcctactcggtgaaacactggatgcggtacgtggag
cacaagcgcaacgcaccgcgcttcatcatcaacacggtgttcgagcgagcgctgaaggag
ctgccgggatcgtacaagctgtggtacaactacctgaagacgctgcgcaagcaggtcaag
ggcaagtgcatcacggacggcgagtacgaggaggtaaacaacgcgttcgagcgttcgctc
gtcttcatgcacaagatgccccgcatctggatggattactgtgcgttcatgacctcgcag
tgcaagatcacgcgcacccggcaggtgtttgatcgtgcgctgcgtgccctcccgataacg
caacatcatcgcatctggccgctgtatctggagtttctcaagcgcttcgacatcccggaa
acggcggtgcgcgtctggcggcgctacttgaagatgtgccccgaggatgcggaagagtac
gtggagttcctcgtgtccatcgggcacctggatgaggcggcccagcagctggccagcata
gtggacaatgagaactttgtctcgaagcacggcaagtcgaaccaccagctgtggaacgag
ctgtgtgagctgatctccaagaacccggacaaggtgcactcgctcaacgtggacggcatc
atccggggtgggctgcgacgttacacggatcagctgggtcacctgtggaactcactggca
gggtactatgtccgcagtgggctgttcgatcgtgcgcgcgatatctacgaggaagccatc
cagacggtcacgacggtgcgtgactttagccaggtgttcgatgcctacgcccagttcgag
gagctcagcctgagcaaggtgatggaggatctggagcgcaatccgaacccgacggaagac
gacgagatcgatgtggaactgcgtatggcccggttcgagtatctgatggaacgccggctg
ctgctgctgaacagcgtgctgttgcgtcagaacccgcacaatgtggccgagtggcacaag
cgagttgagctgtacgaagggaaaccgcacgaaatcatcaacacgtacacggaggccgtg
catacggtgcagccgaagctggccgtcggcaagctctacacgctctgggttgcgtttgcc
aagttctacgaggcaaaccatcagctggacgatgcccggattgtgttcgaaaaagccgta
caggtggattatctgaaggtggacgagctggcgggtgtctggtgtgaatgggcggaaatg
gagatccgccaggagcagtacgagcaggcgctacggatcatgcagcgagcgacggcgatg
ccgaagcgtaaggtagcgtaccacgacgacaccgagacggtccagatgcgggtctacaaa
tcgctcaaactgtggtccatgtatgccgacctggaggagagcttcggaacgttcaagacg
tgcaagcaggtgtacgatcgcatcatcgatctgaagatctgtacgccgcagatcatcatc
aactacgggatgttcctcgaggagcacaactacttcgaggaagcgttcaaggcgtacgaa
aagggcatctcgttgttcaagtggcccaacgtgtacgacatctggaacacgtacctcacc
aaattcctggcacgctacggtggacagaagctggagcgtgcgcgcgatctgttcgagcag
tgcctcgacggttgcccaccggagctggccaaaaacctgtacctgctgtacgcgaagctg
gaggaggagcacggtctcgcacgccacgcaatggccgtctacgagcgggcgacgacgggc
gtgaaggaggacgagatgtatgccatgtccaatctgtacatcaagaaggcggccgatatc
tacggcattccccggactcgccagatttacgagaaagcgatcgaggtgctgccggagggc
gactcgcgcaagatgtgcgtgctgtttgccgagatggaaaccaagctcggcgaaatcgat
cgtgcccgggcaatctacgcgcactgcagccaaatgtgcgatccgcgcgtaacggccgac
ttctggcagacgtggaaggagttcgaaatccggcacggcaacgaggacacgatgcgggag
atgctgcgtatcaagcgctcgatacaggcaacgtacaacacgcagattaacatgatgtcg
gcggccctgatcaacgcggccgtgaccagcggcgaaccaccgaaagatgcaatgcgtgcc
ctggaggtgaaggcggcggaaacgacggcgcgtgccattgcggccgtcggtgccaccggt
ggaaacattatgttcgtgcgcggtgaaacgcagggtggcagtgcaaaggaagatcgtgtc
gtgaatccggacgagatcgacatcgatgacgacgaagacgacgacgacgaagaagctggc
ggcgagggagacgaggccggagaagaggaggacattcgcaagaaggttccgatcgaacgg
caatccatcccagccaaggtgtttggcagtcttcggccacagcaggatgacgatgatgat
gatgataccgaagcaaatggtcattaa
DBGET
integrated database retrieval system
