Anopheles albimanus: 118465403
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Entry
118465403 CDS
T08930
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aali
Anopheles albimanus
Pathway
aali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118465403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aali03019
]
118465403
Enzymes [BR:
aali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
118465403
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118465403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_R3HCC1L
Motif
Other DBs
NCBI-GeneID:
118465403
NCBI-ProteinID:
XP_035789514
LinkDB
All DBs
Position
3:complement(64610374..64612811)
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AA seq
610 aa
AA seq
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MEITTKNFAEQLPEIRKAIQEASFFAIDCEFTGLASDRLIFPFDTPEEVYQKTVEANTQY
IIVQFGLCAFRVEPAADDDDESAPTEPRLTYKCYNFYCYPKGRTHIFSCQGESLRFLADH
GFDFNKLFREGLSFATEAEAERLRSDLKERQANRAAALQAAADGTADDAEPADVNMVPVP
AEHQEQIDETAAKIEAFLQSNDTELIVENCNGFQRKLIYQMIEHKYQQRISTSTITLENN
HKCIKVERKRTAQEDQAIEQKRVAQENEDLQTMIGLSVVLQELSKARKLVIGHNIFLDLL
YTIRQFFKPLPTDFKEFKKLTKEIFPLLLDTKYLCTNAEIKVNVNSSILAHVYEAVSKAP
FSIPKVQSGMPEYGYSVEEQKEHEAGYDAYLTGLCFLGLASRFNMDLQNLTKDATLKQYL
NKIFIARLLDNNYINLNGKEPTHSREHIFYVTFPETWRTGDIVGKFKPFGSVHISWLNNT
SAFVSLHNRIASSSVLKTIGYHPGFAVHSFAQFTQMKLQRLGFKRRRDDSAGAGKQGASA
GATAGTKRTATADNSNAKKEAKEKGETLGNEEDELASDGDEQDANDGDAGADGWRTVKRA
RTTFATNDDW
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaccacgaaaaattttgccgagcagttgcccgagatacggaaagcgatccag
gaggcgtccttctttgcgatcgattgcgagtttaccggactagcctcggatcggctgatc
tttcccttcgatacgccggaagaggtgtatcagaagaccgtcgaggccaacactcagtac
atcatcgtacagttcggcttatgtgcgttccgggtggaaccggcagctgatgatgatgat
gaaagcgcgccaaccgagcccaggctaacgtacaaatgctacaacttttactgctacccg
aaaggccgcacgcacatattcagttgccagggtgaaagcctgcgctttctggcggaccat
gggttcgatttcaacaagctgttccgcgaaggtctctccttcgcaacggaagccgaagcc
gaacggttacggagcgatttgaaggaacgccaagcgaaccgagcagccgcactgcaggcg
gccgccgatggcaccgcggatgacgccgagccagcggacgtgaatatggtgcccgtgcca
gccgaacaccaggagcagatcgatgagacggctgccaagatagaggcctttttacagtcg
aacgatacggagctgatcgtggagaactgcaacgggtttcagcggaagctcatatatcag
atgatcgagcacaagtatcaacagcgaatatccacctcgacgatcacgctggagaacaac
cataaatgcattaaggtggagcgcaagcggaccgcccaagaagatcaagcgatagagcag
aaacgcgtggcccaggagaatgaggatctgcaaaccatgatcgggctatcagtggtgctg
caggagctgtcgaaggcgcgcaagctcgtgatcggtcacaatatatttctggatctcctt
tataccattcgacagtttttcaaacctctcccaaccgattttaaagagtttaagaagctg
acgaaggaaatatttcccctcctcctagatacgaagtacctgtgtacgaatgcggaaatc
aaggtgaacgtcaactcgtccatactggcacatgtttacgaagcggtcagcaaggccccg
ttctccatcccgaaggtacagtccgggatgcctgagtatgggtacagcgtagaagagcag
aaagagcacgaagcgggctacgatgcctacctaacggggctttgcttcttggggcttgca
agccgtttcaacatggacctgcagaacctcaccaaagatgcgaccctgaagcagtacttg
aacaaaatcttcattgcgaggctgttagacaacaattatatcaatctcaacggaaaagaa
cctacgcattccagggaacacattttttacgttaccttcccggaaacctggcgtaccggt
gacatcgtcggtaaattcaaacccttcggctcggtgcacatcagctggctgaacaatact
tcagccttcgtatcgctgcacaatcggatcgcctcgagctcggtactgaaaacgatcgga
taccatcccgggttcgcggtgcacagctttgcgcagtttacgcaaatgaaactgcaacga
cttggatttaagcgaagaagagacgactccgctggtgccgggaagcaaggggctagtgcc
ggagcaactgccggtaccaaacgaaccgcaaccgcagacaactccaacgcgaaaaaagaa
gcaaaagaaaaaggggaaacactaggtaacgaggaggacgaacttgcatcggatggcgac
gagcaggatgccaatgatggggacgccggggccgacgggtggagaacggtgaagcgagct
cgcacaacattcgcaaccaatgatgactggtga
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