Anopheles albimanus: 118467675
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Entry
118467675 CDS
T08930
Name
(RefSeq) exosome complex component RRP4-like isoform X1
KO
K03679
exosome complex component RRP4
Organism
aali
Anopheles albimanus
Pathway
aali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118467675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aali03019
]
118467675
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118467675
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
118467675
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
118467675
NCBI-ProteinID:
XP_035794336
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Position
3:complement(15849100..15850276)
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AA seq
320 aa
AA seq
DB search
MTTNVKIALAADRVDLPLINTEDKNRRLFTPGEIVTSQQGFMRGHGTYMEDDSIKSSVAG
VMVQVNKLITVKALKGRYVGEIGDVVVARVTEVQEKRWKVDTNSRLDSVLLLSSVNLPGG
ELRRRGAEDEKQMRKYLQEGDLISAEVQNVHSDGVLSLHTRSLKYGKLAQGILVKVFPSL
IRRRKTHFHNLPCGASIILGNNGFIWISPILNREGEGENQLTVASIATVRPDCMIVIFVS
ESGGFTQNLADVVTQEDRETVARLKNCILGLAHCKMMLYDTSILYAYEESMKYEVQELLQ
PESMAIVAFNTQQRLQLLSQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaacgtaaaaatagcgttagcggccgaccgcgtcgaccttccgttgataaac
accgaggataaaaaccgccgtttgttcacacccggcgagatcgtcactagccaacaggga
ttcatgcgtggccatggaacgtacatggaggacgacagcatcaaatcttcggtagccggc
gtaatggtacaggtgaacaagctgatcacagtgaaggcactgaaggggcgctacgtaggc
gagattggcgatgtggtcgtggcacgcgttaccgaagtccaggagaagcgttggaaggtg
gacaccaactcgcggctcgattcggtgctgctcctctcgtcggtcaatcttcctggtggc
gagttgcgtcggcgtggggccgaagatgagaagcagatgcgcaagtacctgcaggaaggt
gatcttatttcggccgaggtacagaatgtccactcggacggtgtactgtcgctgcacacg
cgcagtcttaagtacggcaagctagcccaaggcattctggtgaaggtgtttccatcgttg
atccggcgtcgaaagacgcacttccacaatctaccctgcggtgcatcgatcattctgggc
aacaacggcttcatctggatatcgccgatcctgaacagggagggtgaaggtgagaatcaa
ctcacggtggcttcaatagcgacagtgcgaccagattgtatgattgttatttttgtttca
gaaagcggaggctttacgcagaacctggccgacgttgtgacacaggaagatcgtgagacg
gtggcacggttgaagaactgcatcctcgggctggcacactgcaagatgatgctgtacgat
acgagcatcctgtacgcgtacgaggaatcgatgaagtacgaagtgcaggagctactacaa
ccggaatcgatggccatagtggccttcaacacgcagcagcgattgcaactgttaagtcaa
taa
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