Anopheles albimanus: 118468514
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Entry
118468514 CDS
T08930
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
aali
Anopheles albimanus
Pathway
aali03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118468514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aali03021
]
118468514
03019 Messenger RNA biogenesis [BR:
aali03019
]
118468514
Transcription machinery [BR:
aali03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118468514
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118468514
U7-dependent histone pre-mRNA processing factors
118468514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT
HEAT_2
PPP2R1A-like_HEAT
Motif
Other DBs
NCBI-GeneID:
118468514
NCBI-ProteinID:
XP_035795243
UniProt:
A0A182FAZ0
LinkDB
All DBs
Position
2:complement(38248901..38253633)
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AA seq
1199 aa
AA seq
DB search
MENLLRGSGFSETAMLFTDEKIANARTKIVEALNESQTATPSVKCEIIAKLQELLLHSDV
ELLNEFLENILVLSHDSNQDVRKAIAGFIEEMCKQHIALLPKVVGVLFTLLRDTSPNVTK
RVIQGCGSIYRSALQWICSLDDIPEEVEQAWNTLCLVKASILDMIDDNNDGIRTNAIKFL
EGVVILQTYPDEDSMKRENDFSLEDVPLTMKLIRRRKLEDEATKIFELLLEFHGAMHISS
VNLIACTGTLCIIAKLRPTTMTRVIEALKNLHSNLPPTLTNSQVSSVRKNLKMQFLNLLK
HRASYEHQASIAQILVDLGASNGEITRAIPKMDKQEKQRRAKRALESAMAGSLQQAAKRS
KTAEQEAKRSGEKDADGKQSGRTMEIDMEELNEQKARSTKLNEQFLVEALQKVDQVVQLV
VTNMDKVSEQTLQASKPSATLTVEQYIQKIAHTLAVQMSDLKVGPGASAFTKDPPMKVRI
SDEEEKSIILAGKRKAGGDAASGEQPDAEDGHQDALPGGDGGEEDDDDEALSEDDRQKLE
ATRKLRETLERVKGSTTEPKLRQRIKMPKLSEITKPLPKATKETFLTDAVSRILRAERQA
LIGGVSVQRQRIITAFGASFVAPVRQVILDHILEDLPKRIELAFAWLFEEYSLLQGFAPF
THVKHDNGPQYPYTQLLVQLVTNLMERPKDVFRPKESLLKRLYLEAPLMPAEATELLVRM
CELEELADCGMQIAKDLLIRRPPRERTYLNILLRYAYHENGPIREKAIEYVMNVFAVHRV
LTEDIEARALEWLAYLEQENPPEAMFAAEYGRAEHPRTWNEELAKVSLALFLEVMVYDQT
LLQRFSEVYIGANSEMKRAVIRAIEGPIRKIGPDSEELLRLIEQCPKGSETIIIRIIYIL
TEKTLPSPELVERVRTLHHTKVSDVRLLIPVINGLTKKEILNALPKLIKLNPGVVKEVFN
RLLGVGAEFGSAELPLTPAELLVALHTIETSKVELKFIVKATSLCLAEKDVYTHDVLGSV
MQQLVEMTPLPTLLMRTVIQSLTLHPRLFGFVTNLLQRLILKQVWKQKVVWDGFLKCAQR
LTPQSLGILIQLPAPQLQDALNICPEFREPMLEHAREIMEHQIGHVSQPIMDVLLGISPY
SATEANDLQIVGNYSEDAPMLSHLPVKIKQEKKEKDAEPPAAAMPPAASTATPSAKDSH
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctgctgcgaggatcaggctttagcgaaacggccatgctgtttacggacgaa
aaaatagccaacgcccgcaccaagatcgttgaagcgctgaatgagtcgcaaacagctacg
ccctcggtcaagtgtgagatcatcgcaaaacttcaggagctactgttacactcggatgtt
gagctgctgaacgagttcctcgaaaatatcctagtactatcgcacgattcgaaccaggac
gtgcggaaggcgattgccgggttcatcgaggagatgtgcaaacagcacatcgcgctcctg
ccaaaggtggtcggcgtgctgttcacgctgctgcgcgacacgtctccaaatgtcaccaaa
cgtgtgatacagggctgcggatccatttaccggtcggcgctgcagtggatctgctcgctc
gacgacatcccggaggaagtggagcaagcctggaacacgctctgcctggtgaaagcctcc
atactggacatgatcgacgataacaatgacggtatccggacgaacgcgatcaaattcctc
gagggcgtcgtcatactgcagacgtatccggacgaggacagcatgaagcgggaaaacgat
ttctccctcgaagatgtacccctcacgatgaagctgatccgacggcgcaaactggaagat
gaagcgacaaagatttttgagctactgctcgagttccacggtgcaatgcacatttcctcc
gtcaatctgatcgcctgtaccggtacgctgtgtatcattgcaaagcttcgccccacgacg
atgactcgtgtgatcgaagcactgaaaaacctgcactcgaatttgcccccgacgctcacc
aactcgcaggtcagctcggtgcggaagaacttgaaaatgcaattcctgaatctactgaag
catcgcgctagctacgagcatcaggcgtcgatcgcccagattctcgtcgatctcggtgcc
tcaaatggcgagattacccgcgccatacccaagatggacaagcaagaaaagcagcggcgt
gccaagcgagcactggagtcggcgatggctggttcgctccagcaggccgcgaagcgctcg
aaaacggccgaacaggaggcaaagcgcagcggcgagaaagatgctgacggaaagcaatcc
ggacgaacgatggagatagacatggaagagctaaacgagcagaaggcgcgctcgactaag
ctgaacgaacagtttctagtggaggccctgcaaaaagtagaccaggtggtgcaactggtt
gtcaccaatatggataaggtgtccgaacagacgttgcaggcttcgaaacctagcgccacg
ttaacggtggagcaatacatccagaagattgcgcatacgttggccgtacagatgagtgac
cttaaggttggccctggagcatccgcctttaccaaggatcctccgatgaaggtacgcatt
agtgacgaagaagagaaaagtattatcttggccggtaagcgaaaggccggcggtgatgcc
gcttcgggcgagcaaccggacgccgaagatggacaccaggatgcactacccggtggcgac
ggtggggaagaggatgacgatgatgaagccctttccgaggacgatcggcagaagctggag
gcaacgcgtaagctgcgagaaacgctcgaacgtgtcaagggtagcacgacggaaccgaag
cttcgccagcgcatcaaaatgcccaagctgtcggaaatcacgaagcccctgccaaaggcg
acgaaggaaacgttcctcaccgatgccgtctcgcggatattgcgcgcggaacggcaagcg
ctcatcggtggtgtgagcgtgcagcggcagcgcatcataaccgccttcggtgcatcgttc
gttgcccccgtccggcaggtgatactcgatcacattctagaggatttgcccaagcgcatc
gagcttgcctttgcctggctgttcgaggagtacagtctgctgcagggtttcgcgcccttc
acacacgtgaaacacgacaatggaccgcagtatccgtacacgcagctactggtgcaactc
gtcaccaatctgatggaacggccaaaggatgtgtttcgaccgaaggaatcactgctgaag
cgtctgtacctcgaggcacccctgatgccggccgaggcaaccgaactgctggtgcgtatg
tgcgagctcgaagagctggcggattgtgggatgcagatagcgaaggatctgctcattcgt
cggccaccccgcgaacggacctacctcaacattctgctccgctatgcgtaccacgagaac
ggaccgatccgcgagaaagcgatcgagtacgtgatgaacgtgttcgcggtgcaccgtgtc
ctgacggaagacatcgaagcgcgggctctcgaatggctcgcctacttggagcaagaaaat
cccccggaggcgatgtttgctgctgagtatggccgagcggaacatccgcgcacgtggaat
gaagagctggcgaaggtgtccctggcactgtttctcgaggtcatggtgtacgatcagacg
ctgctgcaacgcttctcggaggtgtacataggggccaattctgagatgaagcgagccgtt
attcgtgcgatcgagggtccaataaggaaaatcggaccggacagtgaagagctgctgcgt
ctgatcgaacagtgcccgaagggttcggagacgatcatcatccgtatcatttacattctc
actgaaaagactcttccctcgccggaacttgtggagagggtacgcacgctgcaccatacg
aaagtatcggatgtccgtctgctgatccccgttatcaacgggctaacgaagaaggaaatc
ctcaacgctctaccgaagctgatcaaactgaatccgggcgtagtgaaggaggtgttcaat
cgtttgctcggtgtgggggccgagttcggtagtgcggagctaccgctaacgccggccgag
ctacttgttgccctgcacaccatcgagacgagcaaggtggaactgaagttcatcgtgaaa
gctacctccctgtgcctggcagaaaaggacgtgtacacgcacgatgtgctcggcagtgtg
atgcagcagctggtcgaaatgacaccgctgcccacgctgttgatgcgtactgtcatccaa
tcgctcacgctccatccgcggttgttcgggttcgtcacgaatctactgcagcggctcatc
ttgaagcaggtctggaagcagaaggttgtctgggatggattcctaaagtgtgcccagcgg
ttgacgccccaaagtctaggcatccttattcagctgccggcaccacagctacaggatgcg
ctcaacatttgcccagagttccgggagccgatgctagagcacgcgagagaaatcatggag
catcagatcggtcacgtctcgcaaccgatcatggacgtgttgctaggcatttcgccttac
tcggctaccgaagcgaatgatctacaaattgtgggaaattacagcgaagatgcaccaatg
ttgtcgcacctgccggtaaagattaaacaggaaaaaaaggaaaaggatgccgaaccgcct
gcagcagcgatgccacccgccgccagcaccgctaccccttctgccaaggactcacactaa
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