Anopheles albimanus: 118469058
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Entry
118469058 CDS
T08930
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
aali
Anopheles albimanus
Pathway
aali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118469058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aali03019
]
118469058
Messenger RNA biogenesis [BR:
aali03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118469058
mRNA degradation factors
5'-3' decay
Decapping complex
118469058
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
118469058
NCBI-ProteinID:
XP_035796423
LinkDB
All DBs
Position
2
Genome browser
AA seq
883 aa
AA seq
DB search
MDTFFGFPTNGEDGGGRELKLHSKAETNGEALSSIRLRYFDDEEESDEANDDKYDALNDE
TFGTADKGDWECFHEQLVRLEHEGQKRKDPATATIGDGESQSCDTDTLFDDYDLDLELRS
FDCYETNDEASTRSSPGVAISGDELTSKLRLDPKIWDSTIKRNTPTQSSELSSYQSSAPS
ANRTFSPAHESRPPQGIPSPPVTMISVQDIERNVIQQQQQQKQLMQQQHLLLQQQKLIAH
QQQQLLHQSHLQASSYLSKPNLFPTAMATQQYRTNPPHSAILPMLQSMSSHRVRSPLASA
QVQATSPHPFYRGSAPGPSFLPPRGPQVPAGCMPYNFLTASMNNLTAHPAFGYPYAYPSL
GGPYRPQFPVMPMQHPTSPFFWPPNTYNASFQALTASGVLRDNQYNQCLMQEIQQNHPML
AFHRQVSAAGPNQSLQQNPLQQQEVLRQQQQRQKVSSNGLQAVHQDEYANMMSNREKLWL
VGLQWAQLNLEIPYYSDYYFTMRKQRLMALKSNTVTQCTADSLSKTSSAKSLGPMDMVLT
PSCVIDANHIRNCLEEKEVTSETGHTSTPLLIEKSLGKFHAGSCTTPRKLIEMSSVGENE
QSCGANIAVATAEYSLVQRKVRNVLLLIENLYTLVLKMEDLGNPLAVEAARLLREKRLRE
GELAATFPVDVDERSFSGLVTALVSSVSQDAITAMLGVRKGKILLRRLQTLLRNHSFRWT
LWTMIFKAVPYLRRSDRVDADGCLVGLFDEFECQLQDSKMLNLLRISETIDNDNVLRSIR
ECNFVMSCIICLIFQVELIYGRNPRNIQFSDQEQWVVFLEHVLQTISDAVPLECSIRMRP
DSDIVHTLRVHFERFGSRIDGSGLLDFISSKVNENSGNARFRN
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggacacgttttttggcttccctacgaatggcgaagatggaggaggacgtgaactcaaa
ctacacagcaaggctgaaacaaatggcgaagctctatcgtcaatccgattgcgctacttt
gatgatgaggaagaatccgacgaagcgaacgacgacaagtatgatgctctgaacgatgaa
acattcggtacggctgataaaggtgactgggaatgctttcacgagcaactggtccgcctc
gagcatgaaggccagaagagaaaggacccggcaaccgctaccattggggatggggagagc
caaagctgtgacacggatactttgttcgatgactacgatctggatctggagctgcgaagt
tttgattgctacgaaacgaacgatgaggcaagcactcgcagcagcccaggtgttgccatc
agcggtgatgagttgacaagcaagcttcggctggatcctaagatttgggacagtaccatc
aaacgaaacactccaacacaatcgagcgagctctcttcgtaccagtcaagtgctccaagt
gcgaaccggaccttttcaccggcccatgaatcgcgccctccgcaaggcatcccatctccg
ccggttactatgatttccgttcaggatatcgagaggaacgtcatccagcagcagcagcag
cagaagcagttgatgcagcagcagcatctgttactgcaacagcagaagcttatcgcacac
caacagcagcagcttctacatcaaagtcatctgcaggcatcatcatacctttcgaaacca
aatctatttccgacggcaatggcaacgcagcagtacagaacgaatccgccccactctgcc
attctcccgatgctgcaatctatgtcttcgcacagagtgcgctcaccattggcatcggca
caggtacaggcaacaagtccacatccattctaccgtggctctgcacccggtccaagcttt
ttgcctccacgtggtccccaggttcctgcaggatgcatgccatataactttctgactgca
tcgatgaacaacttaacggcgcatccagccttcggttatccatacgcatacccatcgctc
ggtggcccgtatcgtccacaatttcctgtaatgccgatgcagcatccgacttctccattc
ttttggccaccaaacacctacaacgccagtttccaggcccttactgccagtggcgtgcta
cgagataatcaatacaatcagtgtctaatgcaggaaattcagcagaaccatcccatgctt
gcatttcaccggcaggtatctgctgccggtccaaatcaatcgctgcagcagaatccgcta
cagcaacaggaagtgctccgccaacagcagcaacggcaaaaagtcagcagtaacggattg
caggcggtgcatcaagacgaatacgcaaacatgatgagcaatagagagaagctgtggctg
gtaggtttacaatgggctcaactgaacctagaaataccatactacagcgattactatttc
acgatgcgtaaacaacgattgatggcattgaaaagcaacacggtcacgcagtgcactgca
gacagcctgtcgaaaacttcgtcggcgaagagcttgggccccatggatatggttttgact
ccttcgtgtgtgatcgacgctaatcacattcgcaactgtttggaggaaaaggaagtgaca
tccgaaacaggacacacgagcacaccgttgttgattgaaaaatcgcttggcaagtttcat
gccggtagctgcacaacgcctcggaagctcatcgagatgagttcggttggagaaaacgaa
caatcgtgtggagccaatatagcggtagcaactgcagagtattcattggtccagcgcaag
gttcgcaatgtacttttgctgatcgaaaacctttatacgctggtactaaagatggaagac
ttaggcaatccccttgccgtcgaagcagcgcgattattacgtgaaaaaagacttcgcgaa
ggagaacttgccgctacgtttccggtcgatgttgacgaacgctcattcagtgggctagtg
accgcactagtgtccagcgtttcacaggatgcaataacggccatgttaggagtacggaaa
ggaaaaatcttgctacgacgtttgcaaaccctgctgcggaatcattcctttcgttggaca
ctgtggacgatgatctttaaggctgtaccataccttcgacgaagtgatcgcgttgatgcg
gatggttgcctcgttgggttgttcgacgaattcgagtgccagctgcaggacagcaaaatg
ctcaatctgctacgcatatcggaaacaatcgataacgataacgtgcttcgatcgattcgc
gagtgcaatttcgttatgtcctgcatcatctgcctcatctttcaggtggagcttatctac
gggcgcaatccgcgcaacatccaattcagcgaccaggagcagtgggtggtatttctcgag
catgtgctgcaaaccattagcgatgctgtgccgctcgaatgcagcataaggatgcgaccc
gatagcgatatcgtgcatacactgcgtgtgcatttcgaacggtttggttctcgtatcgat
ggatccggtttactggacttcattagctccaaagtaaatgaaaatagtgggaatgctcgt
ttccgaaattag
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