Anopheles albimanus: 118469065
Help
Entry
118469065 CDS
T08930
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aali
Anopheles albimanus
Pathway
aali03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118469065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aali03021
]
118469065
03036 Chromosome and associated proteins [BR:
aali03036
]
118469065
Transcription machinery [BR:
aali03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118469065
Chromosome and associated proteins [BR:
aali03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118469065
PBAF complex
118469065
GBAF(ncBAF) complex
118469065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
118469065
NCBI-ProteinID:
XP_035796439
LinkDB
All DBs
Position
2:41512527..41519028
Genome browser
AA seq
1455 aa
AA seq
DB search
MEMVSLGPKKDGNPNAEFFTAPETLQGFETVRLWLQKHCKKNLAPDPPTKESLAHLIIQF
IQYQEAKLGKNSQDPPTTRLPIRYFMDFKPGGALCHILSTMYRYKAEQRWRKFDFTVNKN
PMRKDPIGQMVLDIETALIEAECMRLPMVYIRPEVDRATASKINDIVTNHQGEITNDEEE
ATHIIYPVIDPLPEDYARPMFRRDKHVMIHWYYFPESYDTWVPNTFDLPDNIPESPPSPA
ERWRVSASWVIDLDDYNEWMSEEDYEVDEQGRKKVHPHRLGVEDLMSTSGVEDKVKKTPK
VVKRKRSPSPAAKGGGKRKSYRSPAAFQKKARADDEESEDLTKDMDDPLPETNITEVKAS
AAGASSSASGGPATPQPKRDPDMMPMKYATVTDLDEEMERSASGDRAPGGTGATPGVGGG
AGSGGAGSGAGGGGGGGGGDDSQAGKTSDSSNTQDFPQGKEADLEDNVTEQTHHIIVPSY
SAWFDYNSIHVVEKRALPEFFNGKNKSKTPEIFMAYRNFMIDTYRLNPTEYLTSTACRRN
LAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKT
AQPSAAKTLLDLDKKPLVEKKDLLDPMAPGGALGAGGPPGAPGGPPGAGGPVPPGAAAPG
LGAPGMIGSDGIKMEPGSTIPSADPNGQFGLRLDQYAKKPAAMRNKTAASMTREWSEQET
LLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPF
SKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPATMMDAHLKNVEKSSFGG
KFDPYAGLANSGIAGTGPAEKEKEAEEGKEGENKSPAAVAPAAGGAAASGTSPAAATTTD
VEMKDVSKKEDTADKEKATEEPTKAATESADGSPASSGEAAKTAGTATTAEAGAAGSPSA
AATGTAAAPTTSDGASPSAAAAAKEKDGKDAPGEAGTATAASGTVAVAKENGAADPKLFN
EGNLQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTME
REREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQLEQGQWQQQQAAAAQQQQQ
QQAAAAAAQQQQQQHQHSHQHPQHQPPAHGGPAAMMHQQTGQATGPAHNAAMPGNPAANA
QKPPPTPSIAGGPAAATATAAPPGTPIPGSNSSSQPPAPAAAPAAAAAGPTVSLALANQH
PAVSGGPHNPTSIHPPVPASNGIPPSSIHPPPSSTNPSIDGTTTATSGMPPVGGPPHLQH
HHHPAAVTAPSAAPAASPSPAAAGPTTGDPSTVSGAPAAEQAPPAGTVVPPAVAGHPLHP
HPAHDQPGQPSAVNQPAAVASPEGAADRASASETTPPASVPEGTGQETVSSDGATPPPAM
ATTTAAPSNPPPSAS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgtctctggggccgaaaaaggatggaaatcctaatgccgagttctttacg
gcgccggaaacgctgcaaggcttcgaaacggtgcggctgtggctgcaaaagcactgcaag
aagaaccttgctccggatccgccgacgaaagagtcgctcgctcatttgatcatccagttc
atccagtatcaggaggctaagctcggaaagaactcgcaggaccctccaacaacccgttta
ccgatacgatactttatggatttcaagccgggtggtgcgctctgccatatcctgtcgacg
atgtaccgctacaaggcggagcagcgctggcgcaagttcgacttcaccgtaaacaagaac
ccgatgcgcaaggatccgatcgggcagatggtgttggacatcgagacggcactgatcgag
gcggaatgcatgcgcctaccgatggtgtacatccgaccggaagtggaccgtgcgacggcc
tccaagatcaacgacatcgtcacgaaccatcagggcgagatcacgaacgacgaggaggag
gcaacgcacatcatctatccggtgatcgatccactgccggaggattacgctcggcccatg
ttccggcgcgataagcacgtgatgatacactggtactactttccggagtcgtacgatacc
tgggtaccgaacacgttcgatctgccggacaacatccccgagagtccaccgtcgccggcc
gaacgttggcgcgtgtctgcctcgtgggtgatcgatctggacgattacaacgaatggatg
tcggaggaggactacgaggtggacgagcagggacggaagaaggtgcatccgcaccggctc
ggtgtcgaggatctgatgtcgacgagcggggtcgaggataaggtgaagaagacgcccaag
gtggtcaagcgcaagcgttcaccgtcccctgcggccaagggtggtggcaaacgcaagagc
taccgatcgccggctgctttccagaagaaggcccgggcggacgatgaggagtcggaagat
ctaaccaaggacatggacgatccactgccggaaacgaacatcaccgaggtaaaggcgagt
gccgctggtgccagcagttccgcttccggtggaccggcaacaccgcaaccaaagcgcgac
ccggacatgatgccgatgaagtacgcaaccgtcaccgatctcgacgaggaaatggagcga
agcgcaagcggtgatcgtgcgcccggtggcacgggtgccacccccggcgttggtggtggc
gctggtagcggcggcgcaggttccggagccggaggtgggggcggtggtggcggtggcgac
gatagtcaggcgggcaaaacgagtgacagcagcaacacgcaggatttcccgcaaggcaag
gaggcggacctcgaggacaacgtgacggagcagacgcaccacatcatcgtgccatcctac
tcggcctggttcgattacaactcgattcatgtcgtggagaagcgcgcgctgcctgagttc
ttcaacgggaagaacaaatcgaaaacgcccgaaatctttatggcctatcggaacttcatg
atcgatacgtatcgcctcaatccgaccgagtatctgacgagcacggcctgccggcgcaat
ctggccggtgatgtgtgcgcgatcatgcgtgtgcacgcgtttctggagcagtggggtttg
atcaactatcagatcgatgccgactcgcggcctacaccgatggggccaccgcctacctcg
cactttcacgtgctgagcgatacaccgtcggggctgcagccgatcaatccaccgaagacg
gcccaaccgtcggcggccaagaccctgctcgatctcgacaagaaaccgctggtcgaaaag
aaggatctgctggatccgatggctccgggtggagcgctgggagcagggggccccccaggg
gcaccaggtggaccacccggtgctggtggtcctgttccgcccggtgctgccgcaccgggc
cttggtgcgcccggtatgatcggttccgatggtatcaagatggagccgggcagcaccata
ccgagtgcggatccgaacggtcagttcgggctgcggctcgatcagtatgccaagaagccg
gccgcgatgcgcaacaaaacggccgccagcatgacgcgcgaatggagcgaacaggagacg
ctgctgctgctagaggggctcgagatgtacaaggacgactggaacaaggtgtgcgagcac
gtcgggtctcgtacgcaggacgaatgcatactgcactttttgcggctcccgatcgaggat
ccgtacctggaggatgataacacgttcctcggtccactctcctaccaaccgataccgttc
agtaaagccggtaatcctatcatgtcgacggtggccttcctagcgtccgtcgtcgatccc
cgtatcgctgccagtgcggccaaagcagcgatggaggagtttgcggcgattaaggacgaa
gtgccggccaccatgatggatgctcacctgaagaacgtcgaaaagtcaagcttcggcgga
aaatttgatccgtatgcggggctggctaacagcggcatcgccggcactggaccggctgag
aaggaaaaggaagcggaggaaggaaaggaaggtgagaacaagtcacctgcggcggttgca
cctgcagcaggcggtgcagctgcgtctggcacttcgcctgctgcagcaaccacgaccgat
gtcgaaatgaaggatgtttctaagaaggaggacaccgctgacaaagagaaggctaccgaa
gagcccacgaaagcagcgaccgagtctgccgatggttctccggcatcatctggcgaggct
gcaaagacagctggcactgcgaccacagcagaagcaggtgctgctggtagcccgtcggct
gccgctactggtaccgctgcggccccgactacatccgacggtgctagcccctcggccgcg
gccgctgctaaggaaaaggatggaaaggatgctccgggcgaagcgggcactgctacggct
gctagtggtacggtagcggtagcgaaggaaaatggagcagcggatccgaagctgttcaac
gaaggcaacctacaggcggctgcggccgcagcgctggctgctgccgccgttaaagccaaa
catctggctgcggtagaggagcgtaagatcaagagcctggtggcgttgctggtcgagacg
cagatgaaaaagctcgagatcaagctgcgccactttgaggaactggaaacgacgatggag
cgcgaacgggagggactggagtaccagcggcaacagcttatccaggagcgtcagcagttc
cacctggagcagctcaaggcagccgagttccgggcccgccagcaagcccaccagcgattc
cagctcgagcaaggccagtggcagcagcagcaggctgccgctgcccaacagcagcagcag
cagcaagcggccgcagccgccgctcagcagcaacagcagcaacatcagcattcacatcag
catccgcagcatcaaccaccagcgcacggtggaccagcggcaatgatgcatcagcaaacg
gggcaggccacaggaccagcccataacgccgcgatgcccggcaatccggcagctaatgct
caaaagccgccaccgacgccatctatcgctggtggtccagcagcagcaacggccacggca
gcaccaccgggtacgccaatccctggctccaacagcagctctcagcctccggcgccagca
gcagcaccagcagcggcagcagcggggccaacagtctccttagcattggccaaccagcac
ccggcggtcagcggcggtccgcacaatccaaccagtatccatccaccggtgccggcatcc
aacggtattccaccttcctccatccatcctcctccttcctctacgaatccgtctatcgac
ggcactactacggcaactagtggtatgccaccggtgggaggaccgcctcaccttcagcac
caccatcacccagcggcggtgaccgcaccctcggcagcaccagccgcatcgccctccccc
gctgcggctgggccaacaactggcgacccgagcacggtctcgggagctccagcagcagaa
caagcgccaccggccggcacggtagtgccacccgcagtcgcaggccatccgcttcatccg
catcccgcgcacgaccaacccggccaaccttcggcggtcaaccagccggcggcagtggcc
tcaccggaaggcgcagcggacagagcttcagcgagcgagacaacgcctcctgcttcggtc
cccgaaggtacgggccaggagacagtttcatctgatggagcgacccctccaccagcgatg
gccaccaccaccgcagcgccctcgaatcctccaccgtcagcttcataa
DBGET
integrated database retrieval system
