Abyssibius alkaniclasticus: LGT41_0000500
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Entry
LGT41_0000500 CDS
T08825
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGT41_0000500 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0000500 (recO)
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LGT41_0000500 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LGT41_0000500 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
UPH71327
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All DBs
Position
complement(98140..98868)
Genome browser
AA seq
242 aa
AA seq
DB search
MEWRDSGILLTSRRHGEAAAIIEVFTQDHGRHAGVVQGGGARRMAPILQPGAQLAVSWRA
RLEDHIGTFSVEPIQSRAAGLMADALTLAAFGTVTALLSQGLPEREAHPQLYAHTITLAN
SLALGSDWLAEYVRWELLLLRELGYGLDLDQCAVTAQRNDLAYVSPKTGRAVSRAAAGEW
ADKLLPLPDIMLGGVVSSPENVVQALTTTGYFLEHRAFPALGHRQLPAARARLIAALQRR
FN
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggaatggcgggatagcggaattttactgacctcgcggcggcatggtgaagcggcggcc
atcatcgaggtattcacccaggaccacggccgccatgccggggtggtgcagggtggcgga
gcgcggcgcatggcgccgatcttgcagccgggcgcgcagctcgctgtcagctggcgcgcg
cggctggaagaccatattggaacgttcagcgttgaaccaatacaatcgcgcgcggccggg
cttatggcagatgcgctgacactcgccgcctttggcacagttacggccctgctttcgcaa
ggcctgccagagcgggaggcccatccgcagctttacgcgcatacaattacattggcaaac
agccttgccctgggtagcgactggctggccgaatatgtgcgctgggagctgcttttgctg
cgtgagcttggatatggtttagatcttgaccaatgcgccgtcacggcacagcggaatgat
ctggcctatgtgtcccccaaaaccggccgcgcggtcagccgcgcggcggcgggtgaatgg
gccgacaagctgcttccgctgcccgatatcatgctcggcggcgttgtctccagccctgaa
aatgtggttcaggccttaaccaccaccggatattttctggagcatcgggcctttcccgcg
cttggccacaggcaattgccagccgcgcgcgcccggctgatcgcggcgttacagcgtcgt
ttcaactag
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