Abyssibius alkaniclasticus: LGT41_0001345
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Entry
LGT41_0001345 CDS
T08825
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LGT41_0001345 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aalk03011
]
LGT41_0001345 (rpsD)
Ribosome [BR:
aalk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LGT41_0001345 (rpsD)
Bacteria
LGT41_0001345 (rpsD)
Archaea
LGT41_0001345 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
S4_2
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
UPH71489
LinkDB
All DBs
Position
complement(246194..246814)
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AA seq
206 aa
AA seq
DB search
MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKNKLSDFGTQLRAKQKLKG
YYGDLTEKQFRRIYGEAERIKGDTGENLIGLLERRLDAVVYRSKLVPTVFAARQFVNHGH
VTVNGKKVNIPSYRVNEGDVIEVRERSKQMALVLEAVASAERDTPEYLNCDHSKLVVTFV
RTPTLSDVPYPVVMEPNLVVEFYAKN
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaacgcacgtctgccaagtataaaattgaccgccgcatgggcgaaaacatttgg
ggccgccccaaatcgcccgtcaaccgccgcgaatatggccccggccagcacggccagcgc
cgcaagaacaaactttctgactttggcacccagctgcgcgccaagcagaagctgaagggt
tactatggtgacctgaccgaaaaacagttccgccgcatctatggggaagccgagcgtatc
aagggtgataccggcgaaaacctgatcggcctgctggaacgccgcctcgatgcggttgtc
taccgctccaaacttgtgccgaccgtgtttgcggcccgccagtttgtgaaccacggccat
gtgaccgtgaatggcaagaaagtaaacatcccgtcctatcgtgtgaacgagggcgacgtg
atcgaagtgcgcgagcgctccaagcagatggcactggtgctggaagccgtggcctcggcc
gagcgtgacacgccggaatatctgaactgcgaccacagcaaactggttgtaaccttcgtg
cgcaccccgacgctttcggatgtgccctatccggtggttatggaaccgaacctcgtggtc
gaattttacgcgaaaaactaa
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