Abyssibius alkaniclasticus: LGT41_0001405
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Entry
LGT41_0001405 CDS
T08825
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk00220
Arginine biosynthesis
aalk00240
Pyrimidine metabolism
aalk00250
Alanine, aspartate and glutamate metabolism
aalk01100
Metabolic pathways
aalk01110
Biosynthesis of secondary metabolites
aalk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LGT41_0001405 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LGT41_0001405 (carB)
00220 Arginine biosynthesis
LGT41_0001405 (carB)
Enzymes [BR:
aalk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LGT41_0001405 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
CoA_binding_2
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UPH71500
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All DBs
Position
257461..260790
Genome browser
AA seq
1109 aa
AA seq
DB search
MPKRTDISSIMIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPITPDMVARIIEKERPDALLPTMGGQTGLNTALALDDMGVLEKFGVELIGARR
EAIEMAEDRKLFREAMDRIGIENPRATIIAAPKLENGKYDRKAGLAEAMAAIEFVGLPAI
IRPAFTMGGTGGGVAYNREDYEKICASGLAASPVAQILVDESLLGWKEYEMEVVRDTADN
AIIICSIENVDPMGVHTGDSITVAPALTLTDKEYQLMRSHSINVLREIGVETGGSNVQWA
VNPADGRMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELDNDITKVTPASF
EPSIDYVVTKIPRFAFEKFPGAKDDLTTAMKSVGEAMAIGRTIHESLQKALASMETGLTG
FDEIEIEGEGEGALIAALSKVTPDRIRVIAQAMRMGGSDDLIHSVTRFDPWFLARIREIV
DAEAEIRANGLPDSAEALRGLKMLGFSDARLARLTGLDEATIRATRGRLGVHASFKRIDT
CAAEFEAQTPYMYSTYEAPAMGEVECESRPSDRKKVVILGGGPNRIGQGIEFDYCCCHAC
YALSDAGYETIMVNCNPETVSTDYDTSDRLYFEPLTLECVLEILRTEQQNGSLHGVIVQF
GGQTPLKLADALQDAGIPILGTTPDAIDLAEDRERFQQLLTSLGLKQPVNGIASTDAQAF
EIAGKVGYPLVIRPSYVLGGRAMEIVRDTEQLKRYITNAVTVSGDSPVLLDSYLTGAIEV
DVDALSDGKSVHVAGIMEHIEEAGVHSGDSACCLPPHSLSPETVAELKRQTVQMALALNV
VGLMNVQFAIKGDDIYVLEVNPRASRTVPFVAKATDSAIASIAARLMAGEPLANFPQRAP
YPAGVGPDTPLPLMDKLTLADPITPWFSVKEAVLPFARFPGVDTLLGPEMRSTGEVMGWD
RTFALAFLKAQMGAGVDLPTEGRVFISIKDSDKTEALADAARSLVALGYELVATRGTANF
LNTAGAPCTLVNKVYEGRPNIVDMLKNNDIALVFNTTEGSQAINDSREIRAVALMDKIPY
FTTAAGSISAVAAIRARAEGDVSVRTLQG
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagaaccgatatttcttccattatgatcatcggcgcgggccctatcgtgatt
gggcaggcttgcgagtttgactattccggcgcccaagcctgcaaggctttgcgcgaggaa
ggctaccgtgtcatccttgtgaactccaaccccgccaccatcatgaccgacccggacatg
gccgatgccacctatattgagccgatcacgcccgacatggtggcccgcatcattgaaaaa
gagcgccccgatgcgctgctgcccacaatgggcgggcagacggggctgaacaccgcgctg
gcgctggatgatatgggcgtgctggaaaaattcggggtcgagctgatcggcgcacgccgt
gaagccattgaaatggccgaagaccgcaagctgtttcgcgaagcgatggaccggatcggg
attgagaacccccgcgccacgatcatcgccgcccccaagcttgagaatggcaaatatgac
cgtaaggccggtctggccgaggcgatggcggcgattgaattcgtcggcctgcccgccatc
atccgccccgcctttacaatgggcggcaccggcgggggcgtggcctataaccgtgaggat
tacgagaagatctgtgcgagcggccttgccgcctcgcccgtggcgcaaattctggtcgac
gagtctctgctcggctggaaggaatacgagatggaggtggtgcgcgacacggccgacaat
gccatcatcatctgctccattgagaatgtggacccgatgggtgtgcataccggcgacagc
atcaccgtcgccccggccctgacgctgaccgacaaggaataccagctgatgcgcagccat
tccatcaacgtgctgcgcgagattggcgtggaaaccggcggctccaacgtgcaatgggcg
gtgaacccggccgatggccgcatggtggtcatcgagatgaacccgcgtgtgagccgctcc
tcggcactcgcctccaaagccacgggctttccgattgcgaaggtcgccgcgaagctggcc
gtgggctacacgcttgatgagcttgacaatgacatcaccaaggtcacgcccgcgagcttt
gagccgagcatcgactatgttgtcaccaaaatcccgcgctttgcgtttgaaaagttcccc
ggtgcgaaggatgacctgaccaccgccatgaaatcggtcggcgaggcgatggccattggc
cgcacgatccacgagagcttgcaaaaagcactggccagcatggaaaccggcctcaccggt
tttgatgagatcgagatcgagggtgaaggtgaaggcgcgctgatcgccgcgctttccaaa
gtcacccccgaccggattcgcgtgattgcgcaagccatgcgcatgggcggttcggatgat
ctgattcattccgtcaccaggttcgacccctggttccttgcccgtatccgcgagatagtg
gatgccgaggccgagatccgcgccaatggcctgcctgatagcgccgaagccctgcgcggc
cttaagatgctgggcttttccgatgcccgccttgccaggctgaccgggctggacgaggcc
acaatccgcgccacgcgaggccggctgggcgttcatgcgagcttcaagcgcatcgacact
tgcgccgccgagttcgaggcgcagaccccctatatgtattccacctacgaagccccggcg
atgggcgaggtggaatgcgaatcgcgcccgtccgaccgcaagaaagtcgtcattctcggc
ggtggccccaaccggatcgggcagggcatcgagtttgactattgctgctgccatgcctgc
tatgcgctgtccgatgcaggctatgagacgatcatggtcaactgcaacccggaaacggtt
tcgaccgattatgacacgtccgaccgtttgtatttcgagccgctcacgctggaatgcgtt
ctggaaattctgcgcaccgagcagcagaatggctcgctgcacggcgttatcgtgcaattc
ggcggccagaccccgttgaagctggccgatgcgctgcaggacgcgggcatcccgattctg
ggcaccacgcccgatgcgattgacttggctgaagaccgcgagcgcttccagcaattgctg
accagccttgggttgaaacagccggtgaacggcatcgccagcaccgatgcgcaggcgttt
gaaattgccggcaaggtcggctatccgctggtcatccgcccgtcatatgtgctggggggg
cgggcgatggagattgtgcgcgataccgagcagctcaaacgttacatcaccaatgctgtt
acggtttcgggcgacagccccgtgctgctcgacagctatctgaccggcgcgatcgaggtg
gatgtcgatgcgctgtccgatggcaaatcggtgcatgtggctggaatcatggaacatatt
gaagaggctggcgtgcattcgggcgattctgcctgctgcctgccgccgcattcgctttcg
cccgaaaccgtggccgagttgaagcgccagaccgtgcaaatggcgctggcgctgaatgtc
gtgggcctgatgaatgtgcaattcgccatcaagggcgacgatatttatgtgctggaggtg
aacccgcgcgccagccgcaccgtgccctttgtcgccaaggcgaccgatagcgcgattgcc
tcgatcgccgcgcggcttatggcgggcgagccgcttgcaaatttcccgcagcgcgcgccc
taccctgctggcgttggccccgacacgcccttgccattgatggacaagctcaccctggcc
gacccgatcacgccgtggttctcggtcaaggaggcggtgctgccctttgcccgcttcccc
ggtgtcgacacgctgcttggccccgaaatgcgctccaccggcgaggtgatgggctgggac
cgcaccttcgcgctggccttcctgaaggcgcaaatgggggcgggcgttgatctgccaacc
gagggccgtgtgttcatctcgatcaaggattccgacaagaccgaggcgctggccgacgcg
gcgcgcagccttgttgcactgggctatgagctggtcgccacgcgcggcacggcgaatttc
ctcaatacggctggcgcgccctgcacgctggtcaacaaggtctatgaagggcgcccgaac
attgtcgatatgctgaaaaacaacgacatcgcgctggtgttcaacactaccgagggcagc
caggcgatcaatgacagccgtgaaattcgtgccgtcgcgctgatggacaagatcccctat
ttcaccacggcggcgggcagcatttcggcggttgccgcgattcgcgcgcgcgccgaaggc
gatgtcagcgtgcgcacgcttcagggatag
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