Abyssibius alkaniclasticus: LGT41_0001585
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Entry
LGT41_0001585 CDS
T08825
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGT41_0001585 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalk03019
]
LGT41_0001585 (groL)
03110 Chaperones and folding catalysts [BR:
aalk03110
]
LGT41_0001585 (groL)
03029 Mitochondrial biogenesis [BR:
aalk03029
]
LGT41_0001585 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aalk04147
]
LGT41_0001585 (groL)
Enzymes [BR:
aalk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LGT41_0001585 (groL)
Messenger RNA biogenesis [BR:
aalk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LGT41_0001585 (groL)
Chaperones and folding catalysts [BR:
aalk03110
]
Heat shock proteins
HSP60 / Chaperonin
LGT41_0001585 (groL)
Mitochondrial biogenesis [BR:
aalk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LGT41_0001585 (groL)
Exosome [BR:
aalk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LGT41_0001585 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LGT41_0001585 (groL)
Exosomal proteins of breast cancer cells
LGT41_0001585 (groL)
Exosomal proteins of colorectal cancer cells
LGT41_0001585 (groL)
Exosomal proteins of bladder cancer cells
LGT41_0001585 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
UPH71534
LinkDB
All DBs
Position
complement(284827..286482)
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKDVKFDTDARNRMLKGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELENKFENMGAQMVKEVASRTNDTAGDGTTTATVLAQAIVREGLKSVAAGMNPMDLKRGI
DLAVTNVVASIKAAARPVADSDEVAQVGTISANGESEIGRQIADAMQKVGNEGVITVEEN
KGLETETEVVEGMQFDRGYLSPYFVTNPEKMVVEMEDALILLHEKKLSSLQPMVPLLETV
IQSGKPLLIIAEDVDGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLENVGLDMLGTAKKVTITKDETTIVDGHGEKSEIEARVTQIKQQIEETSSDY
DREKLQERLAKLAGGVAVIRVGGNTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QAGKKLADLKGANSDQDAGIKIVRRALEAPLRQIADNAGVDGAVVAGKIRESSDLSFGFN
AQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIADKPEPKGQGGAGGGMPD
MGGMGGMGGMM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtaaaatttgacaccgatgcccggaaccggatgctgaaaggcgtc
gacattctggccaacgccgtcaaagtgacccttgggcccaaaggccgcaacgtggttatc
gacaaaagctttggtgcaccgcgcatcaccaaggacggtgtgaccgttgccaaagaaatc
gaactggaaaacaagttcgagaacatgggcgcgcagatggtgaaagaagtcgccagccgc
accaatgacacggccggtgacggcaccaccaccgcaaccgttctggcccaggccattgtg
cgcgaaggcctgaaatcggttgccgccggcatgaacccgatggatttgaaacgcggcatc
gacctggctgtgaccaatgtcgtcgcctcgatcaaagcggctgcacgccccgttgccgat
agcgacgaagttgcacaggttggcaccatttcggccaacggcgaatctgaaatcggccgc
cagattgcggatgcgatgcagaaagtcggcaacgaaggtgtgatcaccgtcgaagagaac
aagggtctggaaacagaaaccgaagttgttgaaggtatgcagttcgaccgcggctacctg
tcgccctatttcgtgaccaaccctgaaaaaatggttgtcgaaatggaagacgcgctgatc
ctgttgcacgagaagaaactctcctcgttgcagccgatggtgccgctcttggaaaccgtt
atccagtcgggcaagccgctgctgatcatcgctgaagatgttgacggcgaggcgctggca
accctcgttgtgaaccgtctgcgtggtggcctcaaagtggcagccgtgaaagcccccggc
tttggcgaccgtcgcaaagccatgctgcaggacattgccattctgaccggtggtcaggtg
atctctgaagatctgggcatgaaactggaaaatgttggcctcgatatgcttggcaccgcc
aagaaagtgaccatcaccaaggacgaaaccaccattgtggacggtcatggcgagaagtcg
gaaatcgaagcccgcgtgacccagatcaaacagcagatcgaagaaaccagctccgattat
gaccgcgaaaaactgcaggaacgtctggccaaactggctggcggcgttgcggtaattcgt
gttggtggcaacaccgagatcgaagtgaaagagcgcaaagaccgcgttgacgatgcgctg
aacgcaacccgtgcagccgtgcaagaaggcattgttgtgggtggtggtgttgcgcttgtg
caggccggcaagaaactggccgacctgaagggcgcaaactctgaccaggacgccggtatc
aaaatcgtgcgtcgtgctttggaagcgcccttgcgccagatcgccgacaatgccggtgtt
gacggggccgttgttgcgggcaaaatccgcgaaagcagcgacctttcctttggcttcaac
gcccagaccgaagaatatggcgacatgttcaagtttggcgtgatcgaccccgccaaagtg
gtgcgcactgcgctggaagatgcagcctcggttgccggcctgctgatcaccaccgaagcg
atgatcgccgacaagcccgagccgaaaggccagggcggtgccggtggcggtatgcccgat
atgggtggcatgggcggcatgggcggcatgatgtaa
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