Abyssibius alkaniclasticus: LGT41_0001745
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Entry
LGT41_0001745 CDS
T08825
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGT41_0001745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0001745
Enzymes [BR:
aalk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGT41_0001745
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LGT41_0001745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
zf-UDP
Motif
Other DBs
NCBI-ProteinID:
UPH71564
LinkDB
All DBs
Position
complement(318570..320777)
Genome browser
AA seq
735 aa
AA seq
DB search
MSDLFGQERDFDEGEAVAVLTTEPLDRYLDYRAPFGGVDLGALVEVPLGPRRVLGAVWGP
GQGGFDRAKLRSIIRVLDEPAIPAPMRDFLARAADYTITPLSQMLRLATRAPGLMHPPGD
TKVLVAGTAAPDRMTPAREKVLALVEDYGGLPFQPGELANMAGVSGSVIKGLVAQGCLVE
VFAPRDGPFPALDPGLPGAALNAEQAVAAEQLRAGVASGTYGTTLLKGVTGSGKTEVYLE
AVAEALRLGQQALVLLPEIALSVEFMARVEKRFGARPAEWHSGVTMAERRRAWKAVARGQ
AQLVVGARSALFLPFRHLGVIVVDEEHDGSYKQEDGVHYHARDMAVLRASILGAQVVLAS
ATPSLETWANAQAGKYARLDLAERFGVAEMPELSAIDMRTEPMQPNQWISPMLADAVAQR
MADGEQALLFLNRRGFAPLTLCRACGHQIGCEYCDARMVEHRFLARLVCHQCGESKPVPA
ACPSCAVEGKLAPIGPGVERLAEEVAARFPDARIAVLSSDMAGSTRAMKARILEIAQGGA
DIIIGTQMVAKGHNFPLLTLVGVIDADLGLEGGDLRAAEKSFQLIRQVAGRAGRADKPGQ
ALIQSHQPDHPLIKAIIAGDEEAFWAAEAASRARAGAPPYGRMAGIVLSGPDEGAVYALA
REMAQAWAGRAKIDSQLFGPAAAPVARIRGRHRVRMLIKTPKGAPIQEALRRWTDGLRLP
ANIRLTIDIDPQSFY
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacttgtttggccaggagcgggattttgatgagggcgaagcggttgccgtgctg
acaaccgagccgctggaccgctatctcgactatcgcgcgccgttcggcggcgtcgatctg
ggcgcgctggttgaagtgccgcttgggccgcgccgcgtgcttggcgcggtctgggggccg
gggcagggcgggtttgaccgtgccaaactgcgcagcatcatccgtgtgctggacgagccc
gccatccccgccccgatgcgcgactttcttgcccgcgccgccgattacaccatcaccccg
ctcagccagatgctgcggctggccacgcgcgcaccggggctgatgcacccgccgggcgat
accaaggtgctggtcgctggcacagccgcgcccgaccggatgacaccggcgcgtgaaaag
gtgctggcgctggtcgaggactatggcggcctgccctttcagccgggcgagttggccaat
atggcgggggtgtcgggctcggtcatcaaggggctggtggcgcagggctgtctggtcgag
gtttttgccccgcgcgacgggccgttcccggcgctcgaccctggcctgccgggggctgcg
ttgaatgccgaacaggcggtggcggcggaacaactgcgcgcgggcgtggcgagcggcacc
tatggcacaacgttgctgaagggcgtaacgggctcgggcaaaaccgaggtgtatctggaa
gccgtggccgaggcgctgaggcttggccagcaggctttggtgctgttgccggaaattgcg
ctgagcgttgaattcatggcccgcgttgaaaaacgctttggcgcgcgccccgccgaatgg
cattcgggcgtgacaatggccgaacgccgccgcgcatggaaggcggtggcgcgcgggcag
gcgcaactggttgtcggcgcgcgctcggcactgtttttgccgtttcggcaccttggggtg
atcgttgtcgatgaagaacatgacggcagttacaagcaggaagacggggtgcattaccac
gcccgcgatatggcggttctgcgcgccagcattctgggcgcgcaggtggtgctggccagc
gccacgcccagccttgagacctgggccaatgcgcaggcgggcaaatatgcgcggcttgat
ctggccgaacggtttggtgtggccgaaatgccggaactgagcgccattgatatgcgcacc
gagccgatgcagccgaaccagtggatttcgcccatgctggccgatgccgtggcgcagcgt
atggccgatggcgaacaggcgctgctgttcttgaaccggcgcggctttgcgccgcttacg
ctttgccgtgcctgtggccaccagatcggctgcgagtattgcgatgcgcggatggtcgaa
caccggttcctggcgcggctggtctgccatcaatgcggcgagagcaagcccgttcctgcc
gcctgcccgtcatgcgcggtggaaggcaagctcgcccccatcggccccggcgttgaacgc
ctggccgaggaggtggcggcgcgcttcccggatgcgcggattgcggtgcttagctctgac
atggcgggcagcacacgggcgatgaaggcgcggattctggagatcgcgcaaggtggggcc
gatatcatcatcggcacgcagatggtggccaagggccataactttccgctgctcacgctt
gtcggggtgatcgatgccgatctagggctggaggggggagaccttcgcgccgccgagaag
agctttcagcttatcaggcaggtggcgggccgcgccgggcgggccgacaagccggggcag
gcgctgatccaaagccaccagcccgaccacccgctgatcaaggcgattatcgcgggggat
gaggaggcgttttgggcggcagaggccgcaagccgggcgcgtgccggcgcccccccctat
gggcgcatggcggggattgtgctgtctggcccggatgaaggcgcggtctatgcgctggcg
cgcgagatggcgcaggcttgggcggggcgggcaaagatcgactcgcagctttttggcccg
gcggcggcacctgttgcgcgcattcgcggccgccaccgcgtgcgaatgctcatcaaaacc
ccgaaaggcgcgccaatccaggaggcgctgcgccgctggaccgacgggctgcgcctgccc
gccaatatccgcctgacaatcgacattgacccgcaaagcttttattag
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