Abyssibius alkaniclasticus: LGT41_0002010
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Entry
LGT41_0002010 CDS
T08825
Name
(GenBank) beta-eliminating lyase-related protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk00260
Glycine, serine and threonine metabolism
aalk00460
Cyanoamino acid metabolism
aalk00630
Glyoxylate and dicarboxylate metabolism
aalk00670
One carbon pool by folate
aalk00680
Methane metabolism
aalk01100
Metabolic pathways
aalk01110
Biosynthesis of secondary metabolites
aalk01120
Microbial metabolism in diverse environments
aalk01200
Carbon metabolism
aalk01230
Biosynthesis of amino acids
aalk01240
Biosynthesis of cofactors
aalk04981
Folate transport and metabolism
Module
aalk_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LGT41_0002010
09102 Energy metabolism
00680 Methane metabolism
LGT41_0002010
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LGT41_0002010
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LGT41_0002010
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LGT41_0002010
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LGT41_0002010
Enzymes [BR:
aalk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LGT41_0002010
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
UPH71613
LinkDB
All DBs
Position
376040..377362
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AA seq
440 aa
AA seq
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MTNLAMRPWVPAACESLIQRYANETATRSSTDSAARIAALISANRQIHERACFNLNPATN
VMNPRAEAALAAGLGSRPSLGYPGDKYEMGLEAIEEIEVIAAELAAEVFGAKYAEIRVPS
GAIGNLYAFMATCKPGDSIIAPPASIGGHVTHHGAGCAGLYGLITHEAPVLADGYTVDVA
GLRALAHKVRPRLITIGASLNLFAHPVAELRDIADEVGAKLLFDAAHQCGIIASGAWKNP
LAEGAHIMTMSTYKSLGGPASGLIVTNEADIAEGLDAIAFPGMTANFDAAKSAALALTML
DWRDFGAAYGAAMIATARAFANALKDLGLPVFETAQGATSSHQFALEAKGFGGGQAASKT
LRKAGFLACGIGLPIAPVAGDMNGLRIGTPELVRWGVTVDDIPEIAALVAEALRSNDPAS
IAPRTAALRARFNKLHFMHG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccttgccatgcgcccttgggtgcccgccgcttgcgaaagcctgatccagcgc
tatgccaatgagaccgccacgcgcagcagcaccgatagtgccgcccgcatcgccgcgctg
atttccgccaaccggcaaattcacgagcgtgcgtgcttcaacctcaaccccgccaccaat
gtgatgaacccgcgtgccgaggcggctttggctgctggccttggcagccgcccttcgctt
ggctaccccggcgacaaatacgaaatggggctggaggcgatcgaggaaatcgaggtgatt
gccgcggaactggccgccgaggtgtttggcgcgaaatacgccgaaatccgcgtgccatca
ggcgcgattggcaacctttacgccttcatggccacctgcaaaccgggcgatagcatcatc
gccccgccggccagcattggcggccatgtcacccatcatggcgccggttgcgccgggctt
tacgggctcatcacgcatgaagcccccgtgctggccgatggctatacggtcgatgttgcg
ggcctgcgcgcgctggcgcacaaggtccgccccaggctcatcaccatcggtgccagcctc
aacctgttcgcgcatccggtggccgagttgcgcgacattgccgatgaggtgggggccaag
ctgctgtttgatgccgcgcatcaatgcgggatcatcgcttccggcgcgtggaaaaacccg
ctggccgagggtgcgcatatcatgacgatgagcacctataaaagccttggtggcccggct
tcgggcctgatcgtcacgaacgaggccgatattgccgaagggctcgacgccatcgccttt
cccggcatgaccgcgaatttcgatgcggcgaaatcggcggcgctggcgctgaccatgctc
gactggcgcgattttggtgccgcttatggcgcggcgatgatcgccaccgcccgcgccttt
gccaatgcgctgaaagaccttggcctgccggtgtttgaaacggcgcaaggcgcaaccagc
agccaccagtttgcgctggaggccaaaggctttggcggcgggcaggccgccagcaagacc
ctgcgcaaggcggggtttctcgcctgcggcatcggcctgcccatagcgccggttgcgggc
gatatgaacgggctgcgcataggcacaccggaactggtgcgctggggggtgacggttgat
gacattcccgaaattgccgcccttgtggccgaagccctgcgcagcaatgaccctgccagc
atcgccccgcgcacggccgcattgcgcgcgcggttcaacaagctgcacttcatgcacggc
tga
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