Abyssibius alkaniclasticus: LGT41_0002050
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Entry
LGT41_0002050 CDS
T08825
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk00020
Citrate cycle (TCA cycle)
aalk00190
Oxidative phosphorylation
aalk00650
Butanoate metabolism
aalk00720
Other carbon fixation pathways
aalk01100
Metabolic pathways
aalk01110
Biosynthesis of secondary metabolites
aalk01120
Microbial metabolism in diverse environments
aalk01200
Carbon metabolism
Module
aalk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
aalk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
aalk_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LGT41_0002050 (sdhC)
00650 Butanoate metabolism
LGT41_0002050 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
LGT41_0002050 (sdhC)
00720 Other carbon fixation pathways
LGT41_0002050 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
UPF0182
DUF3948
Motif
Other DBs
NCBI-ProteinID:
UPH71621
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All DBs
Position
complement(382783..383175)
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AA seq
130 aa
AA seq
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MADVNRGDRPLSPHLSVYRFQFTMLTSILHRITGMGLAVAAALVVWWFLALAIGEDYFEL
ANAILTSTLGYIILIIALWGLSYHLCNGIRHLMWDIGKGFSLGAAYASAIAVFVGATVLT
VLVIILAQGV
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtaaatcggggcgaccgcccgctttcaccgcatttaagcgtgtatcgcttt
cagttcaccatgctcacctcgatcctgcaccggattacaggtatggggctggcggttgcg
gcggcgctggttgtgtggtggtttctggcgctggcaatcggcgaggattatttcgaactc
gccaatgccatactcacctcgacccttggctatatcatcctgatcatcgcgctctggggg
ctgagctatcatttgtgcaacggtattcggcacctgatgtgggatatcggcaagggcttc
agccttggtgccgcctatgccagcgccattgcggtatttgttggtgcgaccgtgctgaca
gtgcttgtcatcattctggcgcagggggtttga
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