Abyssibius alkaniclasticus: LGT41_0002280
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Entry
LGT41_0002280 CDS
T08825
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGT41_0002280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0002280
Enzymes [BR:
aalk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
LGT41_0002280
DNA repair and recombination proteins [BR:
aalk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGT41_0002280
Prokaryotic type
LGT41_0002280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_5
HHH_8
RecR_HhH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
UPH71665
LinkDB
All DBs
Position
complement(424733..425758)
Genome browser
AA seq
341 aa
AA seq
DB search
MKRDSAVLLAWYDRAARPLPWRRPPGQAGRANPYHVWLSEIMLQQTTVAAVKPYFTAFLA
RWPSVVALAAAEDADVMAAWAGLGYYARARNLLACARAVGAMGGIFPQAEADLRKLPGIG
PYTAAAIAAIAFDIPATVVDGNVERVVARRFAVQTPLPAAKPDLFAHAASLTPQYRPGDY
AQAMMDLGATICTPRSPKCEICPWAHCCKARAQGIEASLPAKTPKAPRPRWLGHAYAAFN
AQGEVLLETRPPKGLLGGMLALPCSDWGEAPAPNPPLVAQWHILNTPVRHVFTHFELHLT
VHWAMTDATPGRGRFTPIPAATDLPSVMRKALAAARAAAGL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgggattccgccgttttgctggcctggtatgaccgtgccgcgcgcccgttgccg
tggcgccggccgccggggcaggcaggccgtgcgaatccttaccatgtgtggctgtcggaa
atcatgttgcagcaaaccaccgtggcggccgtaaagccgtattttacggcatttctggcc
cgctggcccagcgttgtcgcccttgccgcagccgaagatgccgatgtcatggccgcatgg
gccgggcttggctattatgcccgtgcgcgcaaccttctggcctgcgcgcgcgcggttggc
gctatgggcggtatctttccgcaagccgaggctgatttgcgcaagctccccggcatcggc
ccctataccgctgccgccatcgccgccattgcctttgacattcccgccacggtggttgat
ggcaatgtcgagcgggtcgttgcgcggcgctttgccgtgcaaaccccgttgcccgccgcc
aaaccggacctcttcgcacatgctgcaagcctgaccccgcaataccgccccggcgattat
gcgcaggcgatgatggaccttggcgccaccatctgcacgccgcgcagcccgaaatgcgaa
atctgcccctgggcgcattgctgcaaagcccgcgcacagggcattgaagcaagcctgcct
gccaaaaccccaaaagccccgcgccccaggtggctgggccatgcctatgccgctttcaac
gcacagggcgaggtgctgctcgaaacccgcccgcccaaggggctgctgggtggaatgctg
gcgctgccctgttccgactggggcgaagcacccgcgccaaacccgccgcttgtggcgcaa
tggcacatcctcaacacgcccgtgcgccatgtgttcacccatttcgaactgcacctgacc
gtgcattgggccatgaccgatgccactccgggccgcgggcgtttcacacccattcccgcc
gccaccgacctgcccagcgtcatgcgcaaggcgctggcggctgcccgcgcggcagcgggg
ctttga
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