Abyssibius alkaniclasticus: LGT41_0003920
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Entry
LGT41_0003920 CDS
T08825
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGT41_0003920 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0003920 (mutM)
Enzymes [BR:
aalk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LGT41_0003920 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGT41_0003920 (mutM)
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGT41_0003920 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UPH71975
LinkDB
All DBs
Position
756672..757529
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AA seq
285 aa
AA seq
DB search
MPELPEVETIRRGLLPVMEGAVIARLTLRRAGLRWPFPAAMAETVSGARVLLLRRRAKYI
LADLDNRHTLLFHMGMSGRILIEGASPDARAHDRAAPTRHDHALFDMHNGARITFNDARR
FGMLDLFATGAEAAQPLLAKLGPEPLGNDLNAAALADRFAGRKSPIKTALLDQRIIAGLG
NIYVSEALWRAQIHPETPIGALGLAQIETLIRQIRDVLDEAIAAGGSSLRDYRQTDGELG
YFQHGFAVYDRAEHPCARPGCAGQIARITQAGRSSYFCPLCQPKG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagttgaaaccatccgccgcggcctgctgccggtcatggagggc
gcggtgattgcacggctgaccctgcgccgcgccgggctgcgctggccattccccgccgct
atggccgaaaccgtcagcggcgcgcgcgtattgctgctgcgccgccgcgccaaatacatt
ctggccgatctcgacaaccgccacacgctgctgtttcatatgggcatgtcggggcggatt
ctgatagagggcgccagccccgatgcccgcgcgcatgaccgtgccgcgcccacccggcac
gaccatgcgctgtttgatatgcacaacggcgcgcgcatcaccttcaacgatgcccgccgc
tttggaatgctcgatctttttgccaccggggccgaggcggcccagcccttgctggccaaa
ctggggccggagcctttgggcaatgatctgaacgccgctgcgctggccgaccggtttgcc
gggcgcaaatctccgatcaaaaccgcgctgctggatcagcgcattattgcggggcttggc
aatatctatgtgtccgaggcgctgtggcgtgcgcaaattcaccccgaaacccccatcggc
gcgctgggccttgcacaaatcgaaaccctcatccgccaaatccgcgatgtgctggacgag
gcgatagcggccggtggctccagcctgcgcgactatcgccagaccgatggtgaactcggc
tatttccagcatggttttgcggtgtatgaccgcgccgaacacccctgcgccaggccgggc
tgcgccgggcagattgcgcgcatcacccaggccgggcgttccagctatttctgccccctc
tgccagccaaagggttga
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