Abyssibius alkaniclasticus: LGT41_0004040
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Entry
LGT41_0004040 CDS
T08825
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
aalk
Abyssibius alkaniclasticus
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aalk03016
]
LGT41_0004040 (mnmE)
Transfer RNA biogenesis [BR:
aalk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LGT41_0004040 (mnmE)
Prokaryotic type
Methyltransferases
LGT41_0004040 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
HflX_C
ABC_tran
Arf
Cellsynth_D
RsgA_GTPase
GBP
DUF2564
Motif
Other DBs
NCBI-ProteinID:
UPH71999
LinkDB
All DBs
Position
complement(782858..784153)
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AA seq
431 aa
AA seq
DB search
MDDTIFALASARGRSGVAVVRISGPRSQAALAALGAEMPAPRVAGLRKLRQGDAVLDEAL
VLAFPEPGSFTGEDVVELHLHGGTAVVASVLAALAAVDGLRHAEAGEFTRRALENGRLDL
AQVEGLADLIDAETEAQRRQAMRLMQGDLSQKTALWRQNLVRALSLLEASIDFADEDVPV
DVYPEVNTLLRGLVEIFNKEIKGVGAAERIRDGFEVAILGLPNSGKSTLMNKIAGREVAL
TSEIAGTTRDVIELRIDLGGLAVTLLDTAGLRESGDAIETMGVERARNRAEGADLRVFLL
GEMGELDALGVAFREGDEVVFAKADRAPKEGPAVSGLTGEGIDALLARIGATLQQRTATI
GTAVKQRHMLALQRAATALNAASAQLEWGSAHAELAAEDLRVALRALDSLIGKVDVEQVL
DVIFSSFCIGK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacgatttttgctttagcctcggcgcgcggccggtctggcgttgcggtcgtg
cgcatttccggaccgcgttcgcaagccgcgcttgcggcgcttggcgctgaaatgcccgca
ccgcgcgtggcgggtttgcgcaagttgcgccagggcgatgcggttctggacgaggctttg
gtgctggcctttcccgaaccaggctcgtttaccggcgaggatgttgtcgaacttcacctg
catggcggcacggcggtggtggcatcggtgctggcggcattggccgcggttgatggtttg
cgccatgccgaagcgggcgagtttacccgccgcgcgctggaaaatggccgcctggatttg
gcgcaggtcgaaggcctggccgacctgattgatgccgaaaccgaggcgcaacggcggcag
gcgatgcggctgatgcagggcgatctgagccagaaaaccgcgctttggcgccaaaatctg
gtccgcgcgctttcgcttctggaagcctcgatcgactttgccgacgaggatgtgccggta
gatgtttaccccgaagtgaacacgcttttgcggggcttggttgaaatattcaataaggaa
atcaaaggtgtaggcgcagccgagcggattcgtgacgggtttgaggtggcgattctcggc
ctgcccaatagcggcaaatcgaccctgatgaacaagatcgcggggcgtgaagttgcgctg
acatctgaaattgccggcacaacgcgcgatgtgatcgagctgcgaatcgacctgggcggc
ttggcggtgacattgctcgatacggccgggctgcgcgaaagtggcgatgcgatagagacg
atgggcgttgaacgcgcgcgcaaccgggccgaaggcgccgatctgcgggtgtttctgctt
ggcgaaatgggtgaactggatgcactaggtgttgcttttcgtgagggcgacgaggttgta
ttcgccaaggccgaccgcgcacccaaggaaggcccggcggtttcggggctgacgggcgaa
gggattgacgcgctgcttgcgcgtattggcgccacattgcagcagcgcacggcgacgatt
ggcacggctgtcaaacagcggcatatgctggcgctgcaacgtgccgcaaccgcgctgaat
gcggcgagcgcgcagcttgaatggggcagcgcacatgccgaactggcggcggaagacctg
cgtgtggcattgcgcgcccttgactcattgatcggtaaggtggatgtcgaacaggtgctg
gatgtgatattttccagcttctgtattggcaaatag
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