Abyssibius alkaniclasticus: LGT41_0004430
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Entry
LGT41_0004430 CDS
T08825
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGT41_0004430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0004430
Enzymes [BR:
aalk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LGT41_0004430
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LGT41_0004430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UPH72075
LinkDB
All DBs
Position
857286..858071
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AA seq
261 aa
AA seq
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MAFTLATWNINSVRLRQDIVAKLLGENAPDILCLQECKSPVELMPAEAFSALGYSLIARG
QKGYNGVAILSRIPAVDAGHRDFCAKGDARHVAARLENGVTIHNFYVPAGGDVPDREVNE
KFGHKLDFLTEMRDWFAAEAPEKSIMVGDLNIAPREDDVWSHKQLLKIVSHTPIEVDHLA
QVQNAGNWVDITRANIPEGQLYSWWSYRSKDWDAADKGRRLDHIWATADIAASGHSSHIL
RQARGWEKPSDHVPVFASFDL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttacattggcaacctggaacatcaattcggtgcggttgcgccaggatatcgtg
gcaaaactgcttggcgaaaacgcgcccgacatcttgtgcctgcaggaatgcaaatcgccg
gtcgagcttatgcctgccgaggcgttttcagccctcggctacagcctgattgcccgtggc
cagaagggctataatggcgtagcgatcctgtcgcgcattccggcggtggatgcgggccac
cgcgatttctgcgcgaaaggcgatgcgcggcatgtggcggctcggctggaaaacggcgtg
accatccacaatttctatgtgcccgcaggtggtgatgtgcccgaccgcgaagtgaacgag
aaattcggccacaagctcgactttctcaccgagatgcgcgactggttcgccgccgaggcg
cccgaaaaatccatcatggtgggtgatctgaacatcgcgccgcgcgaagatgatgtctgg
agccacaagcagttgctgaaaatcgtcagccatacgccgatcgaggttgatcatctggcg
caggtgcagaatgcgggcaactgggtcgatattacccgcgcaaatattcccgaaggccag
ctctattcctggtggtcctatcgctccaaagactgggatgctgccgacaagggccgcagg
ctcgaccatatctgggccacggctgacatagcggcttcaggtcattccagccatattctg
cgccaagcacgcggctgggaaaaaccaagcgaccacgtgccggtttttgcgagcttcgat
ctatga
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