KEGG   Abyssibius alkaniclasticus: LGT41_0004705
Entry
LGT41_0004705     CDS       T08825                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
aalk  Abyssibius alkaniclasticus
Brite
KEGG Orthology (KO) [BR:aalk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aalk03016]
    LGT41_0004705 (truB)
Enzymes [BR:aalk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LGT41_0004705 (truB)
Transfer RNA biogenesis [BR:aalk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LGT41_0004705 (truB)
 Prokaryotic type
    LGT41_0004705 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: UPH72128
LinkDB
Position
complement(913840..914745)
AA seq 301 aa
MARRKKGRDVSGWMIIDKPLGPSSAAVVNKVKWALGANKAGHAGTLDPEATGLLAIALGE
ATKTVPYIADALKAYRFTIRLGQATNTDDGEGEVTASSDQRPSDADITAALSQFTGDIMQ
VPPKFSAVKIDGARAYKLARDDEAFEIAARPLFVEELTLASRPDADHAVLEMICGKGGYV
RAIARDLGEKLGCFAHVTALRRIWSGPFDLDDAITLDQVEALAKDPALDTHLLPLETALA
DLPELAATPEGAARLKNGNPGMVIASGVDYGTECWVSLDGAPVAIGHYHAGEVAPARVFN
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcgcggcgcaaaaaggggcgcgatgtctccggctggatgatcatcgacaaaccgctc
ggcccaagctcggcggctgtggtgaacaaggtgaaatgggcgcttggggccaacaaggcc
ggccatgccggcacgctcgaccccgaagccaccgggttgttggccatcgcgctgggcgag
gccaccaaaaccgtgccctatatcgccgatgcgctgaaagcctatcgcttcaccatccgc
cttggccaggccaccaataccgatgatggcgagggcgaggtgacggcatcgtctgaccag
cgcccgagtgatgccgacatcaccgccgcgctttcgcagttcaccggcgacatcatgcag
gtgccgccgaaattctctgccgtgaaaatcgacggcgcgcgcgcttataagctggcccgc
gatgatgaggcgttcgaaatcgccgcccgcccgctgtttgttgaagaactgacactggca
agccgccccgatgccgaccatgccgtgctggaaatgatctgtggcaagggcggttatgtg
cgcgccattgcccgcgatctgggcgaaaagcttggctgctttgcccatgtcaccgctttg
cggcgcatctggtccggcccgttcgaccttgatgatgcgatcacgctcgatcaggtcgag
gcgctcgcaaaagaccctgcgctcgacacccacctgttgccactggaaaccgcgctggcc
gatttgcccgaactggccgccacccccgaaggggccgcgcgcctgaagaacggcaacccc
ggcatggttatcgccagcggtgtcgattatggcaccgaatgctgggtcagcctcgatggc
gcgcccgtggccattggccattaccatgccggcgaggtggcaccggcgcgcgtgttcaac
ctgtga

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