KEGG   Abyssibius alkaniclasticus: LGT41_0006070
Entry
LGT41_0006070     CDS       T08825                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
aalk  Abyssibius alkaniclasticus
Brite
KEGG Orthology (KO) [BR:aalk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aalk02044]
    LGT41_0006070 (tssC)
Secretion system [BR:aalk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LGT41_0006070 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UPH72380
LinkDB
Position
1185152..1186645
AA seq 497 aa
MAEAEKQAEGGATKTIFANEEFAGLLQKEFRPKSDSARTAVEQAVKTLAEQALANTNLVS
DDALKTIEGIIAAIDKTLTAQVNEILHHEDFQKLESAWRGLSYLVNNTETDEMLKIRVLN
ISKKDLGKTLKKFKGTAWDQSPIFKKLYEEEYGQFGGAPYGCLMGDYYFDHSPPDVELLG
EMSKIAAAAHAPFLTGAEPTLFQMDSWSELANPRDLTKIFQTPEYAAWRSLRESQEAQYV
GLAMPRFLGRLPYGSKTDPVEDFSFEEDTDGSDHSKYGWVNAAYGMATNITRSFKMYGWC
TRIRGVESGGTVENLPTHTFPSDDGGVDMKCPTEIAISDRREAELANNGLMPLIHRKNSD
MAAFIGAQSLHKPAEYDDPDATANANLGARLPYLFATCRFAHYLKCIVRDKLGSFKEREA
MQNWLQEWINNYVDFNADISSEEVKAERPLAAAEVVVEEVEGNPGYYSSKFFLRPHYQLE
GLSVSLRLVSKLPSEKG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggctgaagctgaaaaacaagccgaaggtggggcaacgaaaaccatctttgcgaatgag
gaatttgcaggcctgctgcaaaaggagtttcgcccgaaatccgactcggcgcgcactgcg
gttgaacaggcggtaaaaaccctggccgagcaggcgctggccaatacgaatctggtatcg
gatgacgcgctgaagaccatcgaaggcattatcgccgcgatcgacaagacgctgaccgca
caggtgaatgaaattctccatcacgaagattttcagaagctggaaagcgcctggcgcggc
ctgtcctatctggtgaacaacaccgaaaccgacgaaatgctgaaaattcgcgtgctgaac
atttccaagaaggatttgggcaagacgctgaaaaagttcaaaggcaccgcttgggaccag
tcgccgattttcaagaagctgtatgaagaagaatatggccagttcggtggcgcgccctat
ggctgcctgatgggcgattactatttcgaccattcaccgcccgatgtggaactgcttggc
gagatgtcgaaaatcgccgctgcggcacatgcccccttcctgaccggggccgagccgaca
ttgttccagatggatagctggtcggagcttgccaatccgcgcgatctgaccaaaatcttc
cagacaccggaatatgccgcatggcgcagcctgcgcgaaagccaggaagcgcaatatgtc
ggccttgccatgccgcgcttcctgggccgtttgccctatggctccaaaaccgacccggtc
gaggatttctcgttcgaggaagacaccgatggctcggaccattccaaatatggctgggtg
aacgccgcctatggcatggccacgaacatcacgcgttcgttcaaaatgtatggctggtgc
acgcgaatccgcggtgttgaaagcggcggcacggttgaaaacctgcccacgcatactttc
ccgtcggatgatgggggcgtggacatgaaatgcccgaccgagattgcgatttccgaccgt
cgtgaggcagagcttgccaataacggcctgatgccgctgattcaccgcaagaactcggat
atggcggcctttatcggcgcgcaatcgctgcacaaacccgccgaatatgacgatccggac
gcgaccgccaacgccaatcttggtgcgcgtctgccctatctgtttgccacctgccgcttt
gcgcattatctgaaatgtatcgtgcgcgacaagctcggctcgttcaaagagcgcgaagcc
atgcagaactggctacaggaatggatcaacaactatgttgatttcaacgccgacatttcg
tcggaagaggtaaaggctgaaagaccgttggccgctgctgaagtggtcgtcgaggaggtc
gagggcaaccccggttattactcttcgaagttcttccttcgcccgcactatcagctggag
gggctgtcagtttcgctacgtttggtttcgaaactaccgtcagaaaaaggctga

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