Abyssibius alkaniclasticus: LGT41_0006250
Help
Entry
LGT41_0006250 CDS
T08825
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk02024
Quorum sensing
aalk03060
Protein export
aalk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LGT41_0006250 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LGT41_0006250 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LGT41_0006250 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aalk02044
]
LGT41_0006250 (ffh)
Enzymes [BR:
aalk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LGT41_0006250 (ffh)
Secretion system [BR:
aalk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LGT41_0006250 (ffh)
Eukaryotic Sec-SRP protein
LGT41_0006250 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_16
Phage_TAC_11
AAA_22
AAA_31
ResIII
TctA
AAA_14
DUF6263
YqeC
AAA_19
AAA_5
NACHT
AAA_18
Thymidylate_kin
AAA_7
APS_kinase
ABC_tran
DO-GTPase1
VirC1
KTI12
6PF2K
TetR_C_7
Motif
Other DBs
NCBI-ProteinID:
UPH72413
LinkDB
All DBs
Position
1229358..1230854
Genome browser
AA seq
498 aa
AA seq
DB search
MFETLSDRLSGVFDRLTKQGALSDDDVATALREVRVALLEADVSLPVVRDFVKSVQEKAT
GQAVTRSVSPGQQVVKIVHDALVATLSGGDEGAGALKIDNPPSPILMVGLQGSGKTTTTA
KLAKRLKDRENKRVLMASLDVRRPAAMEQLAILGKQIGVDTLQIVAGQDPVAIAKRAKQQ
ATLGGYDVFMLDTAGRLHIDDVLMDEVIAVRDATNPRETLLVVDGLTGQDAVNVAEQFDG
KIGISGVVLTRMDGDGRGGAALSMRAITGKPIKFTGQGEKMDALEEFHPSRVAGRILGMG
DIVALVEKAQETLEAEQAERMMKRFQKGQFNMNDMKGQLEQMLKMGGMSGMMGMLPGVGK
MQKQMESAGFDDSVLRRQIALINSMTKRERARPELLQASRKKRIAKGAGLEVPELNKLLK
MHRQMADMMKKMGKMGKKGLMRGGMGALFGKGAAGMPGAGAAGQPGAAQGALPPGFPGMG
KGLPSDLPGGLSGFGKKK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaccctttcagaccgcctgtcaggcgtatttgaccggctgaccaagcagggc
gcgctgtcggatgatgacgtagcaaccgccctgcgcgaggtgcgcgtcgctttgctggaa
gccgacgtttccttgcccgttgtgcgcgatttcgtcaaatcggtgcaggaaaaggccacg
ggccaggcggttacgcgctcggtgtcgcccggccagcaggttgtcaagatcgtgcatgac
gcgcttgtcgccacgctttcgggcggggatgagggcgcgggcgcgctgaaaatcgacaac
ccgccatcgcccattctgatggtaggtttgcagggttcgggcaaaaccacaaccaccgcc
aagctcgccaaacgcctgaaagaccgcgagaacaagcgcgtgctgatggccagcctcgac
gtgcgccgccccgcggcgatggagcagctggcgattctcggcaagcagatcggcgtcgac
acgctccagattgtggcgggccaggaccctgttgccattgccaaacgcgccaaacagcag
gccacactgggcggctatgatgtcttcatgctcgacaccgcgggccgtttgcatattgac
gatgtgctgatggatgaggtgattgccgtgcgcgacgccaccaatccgcgcgaaaccctg
ctggtggttgacgggctgaccggccaggacgcggtgaatgtggccgagcagttcgacggt
aaaatcggcatttccggcgttgtcctgacccgtatggatggtgacgggcgcggcggtgcg
gcgctgtcgatgcgcgccattaccggcaagccgatcaagtttaccggccagggcgaaaag
atggacgcgctggaagagttccaccccagccgcgttgcaggccgcattctgggcatgggc
gacattgttgcgctggtggaaaaggcccaggaaacgctggaggccgaacaggccgagcgc
atgatgaagcggttccagaagggccagttcaacatgaacgacatgaagggccagttggaa
cagatgctcaagatgggcgggatgagcggcatgatgggaatgcttcccggcgttggcaaa
atgcaaaagcagatggaaagtgcgggctttgatgattccgtgctgcgccgccagatcgcg
ctgatcaattccatgaccaaacgcgaacgcgcgcgccccgaattgctgcaggccagccgc
aagaagcgtattgccaaaggcgcggggctggaagtgcccgagctgaacaagctgctgaaa
atgcaccgtcagatggccgatatgatgaagaaaatgggcaagatgggcaaaaagggcctg
atgcgcggcggtatgggcgcgctgtttggcaaaggcgccgccggaatgcccggcgcgggt
gccgcaggccagcccggtgccgcccagggcgcattgccccccggcttccccggcatgggc
aagggccttccatcggatctgcccggcgggctaagcggatttgggaagaaaaagtga
DBGET
integrated database retrieval system
