Abyssibius alkaniclasticus: LGT41_0006295
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Entry
LGT41_0006295 CDS
T08825
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk00550
Peptidoglycan biosynthesis
aalk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LGT41_0006295
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aalk01002
]
LGT41_0006295
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aalk01011
]
LGT41_0006295
Enzymes [BR:
aalk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LGT41_0006295
Peptidases and inhibitors [BR:
aalk01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LGT41_0006295
Peptidoglycan biosynthesis and degradation proteins [BR:
aalk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LGT41_0006295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Beta-lactamase
Nre_C
Motif
Other DBs
NCBI-ProteinID:
UPH72421
LinkDB
All DBs
Position
complement(1235013..1236530)
Genome browser
AA seq
505 aa
AA seq
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MLKNFTRGVILALVASMWAGFAVAQPTASFVMDARTGEVLYARNADLRVHPASLTKMMTL
YLAFVELEAGRITLDQQVTISSHAASMPPSELGLRTGQKVSVRTLIRGAAIRSANDAATA
IGELISGSEAAFAERMTQAAREMGMRNTTFRNANGLTANGHLSTARDMTLLGQRLFRDFP
QYYNLFSRNTTETEMGTIYNTNRRFLSAYRGADGIKTGYTSAAGYNLTSSAQRGQERIIA
TFLGGTSVNQRNQEMARLLDLGFNRAPSRAANVQLAALHLPAPGQSETVIATRANPAERP
NRQEALVRTASRPAHRTAPTLRVAENTIPAAAIEAEQNAISAALVAADAAMNVAAIEAAS
RVEMGDGGDDDIVIAARRPERRPPLDTGVVANVPAETASAELVAQAEQPRSEQARVVVAS
AAIGSWSVQLGAFSTRDKAERHLIQTALAQMESLNGATRDISSTIVNGRTMFRARFIGMS
GDAANRACARLVALTQECLVIAPQI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaattttacgcgcggggtgattctcgcgctggttgcgagtatgtgggccggc
tttgcggtcgcccagcctaccgcttcatttgtcatggatgcacgcaccggcgaggttctg
tatgcgcgcaacgccgatctgcgcgttcatcccgcatcactcaccaaaatgatgaccctg
tatctggcctttgtcgagcttgaggcgggccgcatcacgctggatcagcaggttacgatc
tcatcccatgccgcctcgatgccgccatcagaacttggcttgcgcacgggtcagaaggtg
agtgtgcgcacgcttattcgcggtgccgccatccgctcggccaatgatgccgccacggcc
ataggcgagcttatcagcggcagcgaggcggctttcgccgaacggatgacccaggccgcg
cgcgagatggggatgcgcaacaccacgtttcgcaatgccaacgggctgaccgccaatggc
catctgtcaacagcgcgcgatatgaccctgcttggccagcgcctgtttcgcgactttccg
caatattacaacctgttcagtcgcaacacgaccgaaaccgagatgggcaccatctacaac
accaaccgccgctttctgagcgcctatcgcggtgcagacggaatcaagaccgggtatacc
tcggcggcgggctacaacctgacctcgtcagcccagcgcgggcaggaacggatcatcgca
accttccttggcggcacatcggtcaaccagcgcaaccaggaaatggcgcgcctgcttgac
cttggcttcaaccgcgccccaagccgggcggccaatgtgcagcttgcagccctgcatctg
cccgcccccggccaaagtgaaacggttatcgcgacgcgcgccaaccccgccgaacgcccg
aaccggcaggaagccttggtgcgcacggccagccgcccggcgcatcgcactgcacctacg
ctgcgcgttgctgaaaataccattcccgccgccgcaatcgaggccgagcaaaatgcgatc
agcgccgcgctcgttgccgctgatgccgccatgaatgttgccgcaatcgaggctgcatca
cgtgtggaaatgggcgatggcggggatgacgacatcgtcatagccgcccggcgccccgaa
cgccggccgccgcttgataccggcgtggtggcaaatgttccggcagaaaccgcctcggca
gagcttgtcgcccaggccgagcagccgcgcagcgaacaggcccgcgttgtcgtggcaagt
gccgccattggcagctggtcggtgcagcttggcgccttcagcacgcgcgacaaggccgaa
cggcacctcattcaaaccgcactggcccagatggaaagcctgaatggcgccacgcgtgat
atttccagcaccatcgtgaatggccgcaccatgttccgcgcgcgcttcatcggcatgagc
ggggatgccgccaaccgcgcctgcgcacggctcgtggcgcttacacaggaatgtctggtg
attgcgccgcaaatctag
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