Abyssibius alkaniclasticus: LGT41_0007075
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Entry
LGT41_0007075 CDS
T08825
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LGT41_0007075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalk03021
]
LGT41_0007075
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0007075
Enzymes [BR:
aalk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LGT41_0007075
Transcription machinery [BR:
aalk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LGT41_0007075
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LGT41_0007075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
UPH72567
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All DBs
Position
1391071..1392087
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQTLIRPQQLDIKAGADPKRIATAIAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLKMEVEGPKRVAINATGPGVVTAGDIAE
TNGIEVLNRDHVICHLDDGASLFMELTVNTGKGYVAAEKLRPEDAPIGLISVDALFSPVK
KCSYKVEPTREGQVLDYDKLTLTVETDGSITPEDAIAYGARILQDQLSVFVNFDEPEAAG
RADDEDELEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSAMGLHLGMDIVDWPPENIEDLAKKFEDHF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattggcagacacttattcgtccacagcagttggacattaaagccggc
gcagaccccaagcgcattgcaaccgccattgccgaaccactggagcgtggctttggcctg
acgctgggcaacgccctgcgccgtgtgctgatgtcctcgttgcaaggtgcagcgattact
tcggtgcagatcgacaatgtgctgcacgagttttcctcggttgccggtgtgcgcgaagac
gtgaccgacatcgtgctgaacctcaagggcgtgtcgcttaaaatggaagtcgaaggcccg
aagcgcgttgcgatcaacgcaaccggccccggcgttgtcaccgctggcgacattgccgaa
accaacggtattgaagtgctgaaccgtgaccatgtgatctgccacctcgatgatggcgca
agcctgttcatggagctgaccgtgaacaccggcaagggctatgtggccgccgaaaaactg
cgccccgaagatgcgccgattggcctgatttcggttgatgcgctgttttctcccgtcaag
aaatgctcctacaaggttgaaccgacccgcgaaggccaggtgcttgactatgacaagctg
accctgaccgttgaaaccgatgggtcgatcacgccggaagacgcaatcgcctatggcgcg
cgcattctgcaagaccagctttcggtctttgtgaacttcgacgagcccgaagccgctggc
cgtgccgatgatgaggacgagttggaattcaacccgctcctgctcaagaaggtcgacgag
ctggaactttccgtgcgttcggcaaactgcctcaagaacgacaatatcgtgtatattggc
gatctgattcagaaaaccgaagccgaaatgctgcgcacccccaactttggccgcaaatcc
ttgaacgagatcaaggaagtcctgtcggcaatgggcctgcatttgggtatggatattgtt
gattggccgcccgagaatatcgaagatctggccaagaaattcgaagaccatttctag
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