Abyssibius alkaniclasticus: LGT41_0008565
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Entry
LGT41_0008565 CDS
T08825
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGT41_0008565 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aalk02000
]
LGT41_0008565 (choW)
Transporters [BR:
aalk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
LGT41_0008565 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UPH69874
LinkDB
All DBs
Position
complement(1721487..1722332)
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AA seq
281 aa
AA seq
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MLESILDALTDTKIPIGRSAKQLVDWMIDNVGWLFDAMAKYMNYLIEGILWLLQTPHPLI
VILVMTAITYGLRRKIGTAVMVLLGLLFVVNQGYWDETTETLTLVFTACLVCMAIGVPIG
IYAAHRPRFYAFLRPVLDLMQTLPTFVYLIPAIIFFGLGLVPGLFATAIFVLPAPIRLTQ
LGISATPKDLLEAGQAFGCTKRQLLFRVELPYAMPQIMVGLTQTIMLSLSMVVIAALVGA
AGLGAPVVRALNTVNTALGFESGLVIVVLAILMDRVFRRSE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaagcattcttgacgcgctgaccgatacgaaaattcccatcggccgcagcgca
aagcagcttgtggactggatgatcgacaatgtcggctggctgtttgatgctatggccaaa
tacatgaactacctgatcgagggcattttgtggctgctgcaaaccccgcatccgctgatt
gtcattctggtcatgactgccataacctacgggctgcgccgcaagatcggcacagcggta
atggtgttgcttggcctgctgtttgtggtcaaccagggctattgggacgaaacaaccgaa
acgctgactctggtctttaccgcctgccttgtttgcatggcaatcggcgtgcccatcggc
atttacgccgcacaccgcccgcggttttatgcctttctgcgccccgtgcttgacctgatg
caaacactgccgaccttcgtctaccttatccccgccatcatctttttcggccttggcctg
gtgcccggcctgtttgccaccgccatttttgtgctgcctgcccccattcgcctaacccag
ctcggcatttccgccaccccaaaagacctgctggaggccgggcaggcttttggctgcacg
aagcgccagcttttgttccgggtcgagctaccctatgcgatgccacaaatcatggtcggg
ctgacgcaaaccatcatgctgtcgctctcgatggtcgtgattgccgcgctggtcggtgcc
gccggccttggcgccccggttgtgcgcgcgctcaacaccgtcaacaccgcgcttggcttt
gaatccggccttgtgattgtggtgctggccattttgatggaccgggttttccggcggagt
gaatga
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