Abyssibius alkaniclasticus: LGT41_0008570
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Entry
LGT41_0008570 CDS
T08825
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LGT41_0008570 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aalk02000
]
LGT41_0008570 (choX)
Transporters [BR:
aalk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
LGT41_0008570 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
UPH69875
LinkDB
All DBs
Position
complement(1722405..1723325)
Genome browser
AA seq
306 aa
AA seq
DB search
MKTYLGATALSLTLATGAYAECGTVRFSDVGWTDITATTAVATTLLEALGYETDVKLLSV
PVTYVSMAEGDIDVFLGNWMPTMEGDIAPYREAGTVDTVRENLEGAKYTLAVNSSLAEAG
LTDFANIAAFADQLDGKIYGIEPGNDGNRLIMDMIAANAFGLEGFEVIESSEQGMLAQAE
RAARGGEGIVFLGWEPHPMNANIDMTYLTGGDDWFGPDLGGATVYTNTRAGYAEECPNVG
ALLGNLKFTLALENEIMGAILNDGADPEAAAAAYLAANSDVLGPWLDGVTTHDGGDAMAA
VAAALN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctatcttggcgcgaccgcgcttagcctgacgcttgcaaccggcgcctatgcc
gaatgcggcaccgtgcgtttttccgatgttggctggaccgatattaccgccaccaccgcc
gtcgccacgacattgctggaagcccttggctatgaaaccgatgtaaaactcctgtcggtg
ccagtgacctatgtttcaatggccgagggcgatatcgacgtattccttggcaactggatg
ccaacaatggaaggcgatattgccccctaccgcgaagccggcaccgttgacactgtgcgt
gaaaaccttgaaggcgcgaaatacacgctggccgtgaacagctcgctggccgaagccggg
ctgaccgattttgccaatatcgccgcgtttgccgaccagttggatggtaaaatctacgga
atcgagccgggcaatgacggcaaccgcctgatcatggacatgattgccgcaaacgcattc
gggctggagggttttgaggtgatcgaaagctcggaacaggggatgctggcacaggctgaa
cgcgccgcgcgcggcggtgagggaattgtgttcctgggctgggagccgcacccgatgaat
gccaatatcgacatgacctacctgaccggcggtgatgactggttcggccccgaccttggc
ggcgcgaccgtttacaccaatacccgcgccggctatgccgaagaatgcccgaatgtgggc
gcgctgctgggcaacctgaaattcaccctcgcgcttgaaaacgagatcatgggcgcgatc
ctgaacgatggtgccgaccccgaagcggccgcagccgcctatctggctgccaacagcgat
gtgcttggcccctggctggacggtgtgaccacccatgatggtggcgatgcgatggccgcg
gttgcggcggcgctgaactga
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