Abyssibius alkaniclasticus: LGT41_0010110
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Entry
LGT41_0010110 CDS
T08825
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03030
DNA replication
aalk03430
Mismatch repair
aalk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGT41_0010110
03430 Mismatch repair
LGT41_0010110
03440 Homologous recombination
LGT41_0010110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalk03032
]
LGT41_0010110
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0010110
Enzymes [BR:
aalk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGT41_0010110
DNA replication proteins [BR:
aalk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGT41_0010110
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGT41_0010110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
NTPase_1
Mg_chelatase
nSTAND3
AAA_14
DUF2914
Motif
Other DBs
NCBI-ProteinID:
UPH70165
LinkDB
All DBs
Position
2026660..2027772
Genome browser
AA seq
370 aa
AA seq
DB search
MADEFDIPEPDRVDGAPHPRATLALFGQAAAEQAFLAAQGGGRMHHAWMITGPRGIGKAT
LAWRIARFVLAGGGDDGLFGAPETLDIAPDHPVARRILALGEPGLHLARRSYDDKTKKLK
TVISVDDIRALKSFFNLSAAEGGWRVAIVDAADELNSAAANALLKILEEPPARTLILLVC
HQPARLLPTIRSRCRALRCQPLCDADLGRALVAAGLDAGDDLPALAALCEGSVGEAARLM
ASGGVALYRGIISMLAGAPGLDRAAVAKLGMACSGAANADTYDNTIRLTLLALSRLARAG
AGVPLNVVDALEGRMLARLSPSQVAARNWAALSQEQTARLAHARAVNLDPAQMILDTFLQ
IDTEARRCAS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaatttgatattcccgagcccgacagggtagacggcgcgccgcacccgcgc
gccacgctggccctgttcgggcaggcggcggcagagcaggcatttctggcagcccagggt
ggcgggcggatgcatcatgcctggatgatcaccgggccacggggcattggcaaggccaca
ttggcctggcggattgcgcgtttcgtgctggctggagggggcgatgacgggctgttcggc
gcgcccgaaaccctggatattgcccccgaccaccctgttgcgcgccgaatactggcgctg
ggtgaaccgggtctgcatctggcgcggcgcagctatgatgacaaaaccaagaagctgaaa
accgtgatctcggtcgacgatattcgcgcgctcaaatcctttttcaacctcagcgcggcc
gagggtggctggcgcgtggcaattgtcgatgcggcagatgagctgaacagcgccgccgcc
aatgcgctgctgaaaattctggaagagccgcccgcgcgcacgcttatcctgctggtttgc
caccagcccgcgcggcttctgccgaccattcggtcgcgctgccgtgccctgcgctgccaa
ccgctttgcgatgccgatctggggcgcgcgcttgtcgccgccgggctggatgcgggcgat
gacctgcccgcgcttgccgcgctttgcgaaggttcggtgggcgaggcggcacggcttatg
gccagcggcggtgtggcgctttatcgtggcatcatctcgatgctggcaggtgcgccgggg
ttggaccgtgcggccgtggccaagcttggcatggcctgtagcggggcggccaatgccgat
acctatgacaacacaatccgcctgaccttgctggccctgtcacggctggcacgggccggg
gcgggggtgccgctgaacgtggtcgatgcattggaagggcgaatgttggcccgtctttcc
cccagccaggtggcggcgcgcaactgggccgcgcttagccaggagcagaccgcgcggctg
gcccatgcgcgcgctgtcaaccttgaccctgcgcaaatgatccttgatacctttctgcaa
atagataccgaggcgcgccgctgcgcgagttga
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