Abyssibius alkaniclasticus: LGT41_0010935
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Entry
LGT41_0010935 CDS
T08825
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGT41_0010935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aalk02000
]
LGT41_0010935
Transporters [BR:
aalk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LGT41_0010935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
UPH70311
LinkDB
All DBs
Position
complement(2184455..2185465)
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AA seq
336 aa
AA seq
DB search
MTTRLVKFARMGAAVAAISLAAGAMQAQTILKFSHTDNPGGSRDQAAQVFADLVSEYTEG
RYEVRIFPAGQLGNDPKAIEQLQLGGVDFTVSATGSYATHLPSLNLTAMPFLVDSYEQGW
EFYDNSDWLQGEFAKLPEVGFRVLATWEAGFRSFTTTFPLNSPADASGRKMRVFPNDMIR
WTMEAIGFQTVVMPVTDVYLAIQQGTVDGQENPVDTIVSLKFAEVAPNVTLTRHVYSPLP
LTIAEATWQSFSEADQAAVLRAAAESSAFSRDLVRNSEAAQLEQLAANGATIITPEIGPF
RDAVASVYDQARGVYGDQVDEVLAAAAAIREAMPVE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagactcgtaaaattcgcccgcatgggcgcagcggttgcggcaatcagcctt
gctgccggtgcaatgcaggcacagaccattctgaaattcagccataccgacaaccctggc
ggctcgcgtgatcaggccgcgcaggttttcgccgatctcgtttcagaatataccgaaggg
cgctatgaggtgcgcatcttcccggccggccagcttggcaatgacccaaaggccatagag
caattgcagcttggcggtgtggatttcaccgtatcggccacgggctcttatgccacgcat
ctgccctcgctcaacctgacagccatgccgtttctggtggacagctacgagcagggttgg
gaattttatgacaattcagactggttgcagggcgaattcgccaaactgcccgaggttggc
ttccgcgttctggccacatgggaggccgggttccgcagctttacgacaacctttccgctc
aattctccggccgatgcctcgggccgcaagatgcgcgttttcccgaatgacatgatccgc
tggacgatggaagccatcgggtttcagaccgtggtcatgccagtcaccgatgtgtatctg
gccattcagcaaggcacggtcgacgggcaggaaaacccggttgataccatcgtttcgctg
aaatttgccgaggtggcgccgaatgtgacgctgacgcgccatgtctattcgcccctgccg
ctgaccattgccgaagcgacatggcagagcttttcggaagctgatcaggccgcagtgctg
cgggctgccgccgaatcttcggccttcagccgcgatctggtgcgcaattccgaagccgcg
cagcttgagcagcttgccgcaaacggcgccaccatcatcacccccgagattggcccgttc
cgcgatgctgtcgcaagcgtctatgaccaggcgcgcggtgtttatggcgatcaggtagac
gaagtgctggccgcggccgccgcaattcgtgaagcgatgcccgtcgaataa
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