Abyssibius alkaniclasticus: LGT41_0011580
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Entry
LGT41_0011580 CDS
T08825
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
aalk
Abyssibius alkaniclasticus
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0011580
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LGT41_0011580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
AAA_10
FtsK_SpoIIIE
AAA_16
AAA_30
TrwB_AAD_bind
AprA_N
AAA_25
CbiA
T2SSE
Hydrolase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPH70430
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Position
2323552..2325078
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AA seq
508 aa
AA seq
DB search
MGVDRVFVGGGGADYGLPQELLLKYGNRHGLIAGATGTGKTVSLQILAESFSAQGVPVFL
ADVKGDLSGLGVAGSPDAPLHDAFMKRAATIKFDDYGYDAFPVVFWDMFAQSGHPIRTTI
SEMGPLLLSRLLELTEAQEGILNIAFRIADEQGMLLLDLKDLRAMLVWLGENSAEISLRY
GNIATASVGAIQRRLVVLENQGATQFFGEPALRLEDMIATAPDGRGRINVLAADQLMASP
RLYATFLLWLLSELFEQLPEVGDPDKPKFVFFFDEAHLLFGDASKALLDKVEQVARLIRS
KGVGVYFVTQNPDDVPSDILGQLGNRIQHALRAYTPRDQKALRAAAETFRPNPDFVTETA
IREVGTGEAVVSLLERKGVPGIVQRTLIRPPSSRLGPITAAERAALIAASPLTGLYDTAI
DRDSAFEELSRRTAQAQADQTATNPEAEREFSTGRRYNPGSTTGKPKSTRSRRTDSPTEA
FTKSLSRSVGTKLGNAIVRGVLGGLFRR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgatcgggtttttgtaggcggtggcggggctgattacggcctgccgcaagag
ctgttgttgaaatatggcaaccggcacgggctgattgcgggcgccaccggcactggcaaa
accgtcagcctgcaaattctggccgaaagcttttcagcccagggcgtgccggtgtttttg
gccgatgtgaaaggcgatctttccgggcttggcgtggcaggctcgcccgacgcgcccttg
cacgatgccttcatgaagcgcgccgccacgatcaaattcgatgattatggctatgacgcg
tttcccgtggtgttttgggacatgttcgcgcaatccggccacccgatccgcacgaccatt
tccgagatgggcccgctgctgctgtcgcgcctgctggagctgaccgaggcgcaagagggc
attctgaacattgcctttcgcattgccgacgagcaggggatgctgctgctcgacctgaaa
gacctgcgcgccatgctggtctggctgggggaaaattccgccgagatcagcctgcgctac
ggcaatatcgccacggcaagtgtgggcgccatccagcgccgccttgtggtgcttgaaaat
cagggcgcgacgcagtttttcggcgaacccgcactcaggcttgaagacatgatcgccacc
gcccccgacgggcgcgggcgcatcaatgtgctggcggccgatcagctcatggcttcgccc
cggctttatgccacctttctgctctggctgctgtcagagcttttcgagcaattgcccgag
gtcggcgaccccgacaaaccgaaattcgtcttcttctttgacgaggcgcatctgctgttt
ggcgatgcctccaaggcgctgctcgataaggtcgagcaggtcgcgcggctgatccgctcc
aaaggggttggcgtctattttgtcacccaaaaccccgatgatgtgccgtctgacattctt
ggccagcttggcaaccgcatccagcacgcattgcgtgcctataccccgcgcgaccagaag
gcgctgcgtgccgccgccgaaaccttccgcccgaaccccgatttcgttaccgaaaccgcc
atacgcgaggtgggcaccggcgaggcggtcgtatccttgctggaacgcaaaggcgtgccc
ggcatcgtgcaacgaacgctcatccgcccgccaagctcgcgccttggcccgatcacggcg
gcagaacgcgccgccctcatcgccgccagcccgctgaccgggctgtatgacaccgcgata
gaccgcgacagcgcgttcgaggagctgtcccgccgcaccgcgcaagcgcaggcagaccag
acagcgacaaaccccgaggccgagcgcgagttcagcaccgggcggcgatacaatccgggc
agcacaacgggcaagccgaaatccacccgttcgcgccgcaccgattcaccgaccgaagcc
ttcaccaaatcgctgtcacgctcggtcggcacgaaactcggcaatgccatcgtgcgcggg
gtattgggcgggttgttccgacgctga
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