Abyssibius alkaniclasticus: LGT41_0011860
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Entry
LGT41_0011860 CDS
T08825
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
aalk
Abyssibius alkaniclasticus
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aalk03009
]
LGT41_0011860
Enzymes [BR:
aalk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
LGT41_0011860
Ribosome biogenesis [BR:
aalk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LGT41_0011860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
UPH70481
LinkDB
All DBs
Position
complement(2380067..2380600)
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AA seq
177 aa
AA seq
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MTTILFNKPFNVLSQFTDGGARATLANYITLPGVYAAGRLDRDSEGLLLLTDDGKLQNRI
ASPKFKQPKTYFAQVEGVPSAEAIAKLAAGIVLKDGPTLPARVRAVPPPTWLWPRTPPIR
VRPSIPDSWLEIIITEGRNRQVRRMTAAIGHPTLRLIRFAIGAWTLDGLQNGEWRQV
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgattctgttcaacaagcccttcaacgtgctgtcgcaattcaccgatggcggc
gcgcgcgccaccctggccaactacatcaccctgcccggcgtttatgccgcaggccgattg
gatcgcgatagcgaggggctgttgctgctcaccgatgatggcaagctgcaaaaccgcatc
gccagcccgaaattcaaacagcccaaaacctatttcgcgcaggtcgagggcgttccaagc
gccgaagccattgcaaagcttgcagcaggcattgtgttgaaagacggccccaccctgccc
gcccgcgtgcgcgccgtgccgccacccacatggctatggccacgcactccacccatacgc
gtgcgcccgtccatccccgatagctggctggaaatcatcatcaccgaggggcgcaaccgg
caggtgcgccgcatgaccgccgccatcggccaccccacgctgcggctgatccgttttgcg
attggcgcgtggacactcgacgggctccaaaacggcgaatggcggcaggtatga
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