KEGG   Abyssibius alkaniclasticus: LGT41_0013860
Entry
LGT41_0013860     CDS       T08825                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
aalk  Abyssibius alkaniclasticus
Pathway
aalk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:aalk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LGT41_0013860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:aalk02022]
    LGT41_0013860
Two-component system [BR:aalk02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LGT41_0013860
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 TadZ_N FleQ AAA_2 HTH_50 AAA_16 AAA PDE8A_N GFO_IDH_MocA AAA_30 AAA_7 AAA_22
Other DBs
NCBI-ProteinID: UPH70856
LinkDB
Position
complement(2791098..2792414)
AA seq 438 aa
MNVLLIDDEEDIRASLSQTLELAGFSVTACARAERALDLVDAAFDGVVVSDIRMPRMDGM
ALLEAIAARDAELPVVLITGNADVALAVAAMRAGAHDFIEKPFEPARLVEIARRAVALRK
LTLENRSLRRVLEGDDALAARIRGRSAEIIDLRRQIALLARHDTDVLIEGETGTGKELVA
RALHELSARAGQPFVAINLASLPAASIESELFGHVAGAFPGALRDRRGRFEHARGGTLYL
DEIGALPPGLQVKLLRVVEERAITPLGGNETIALDVRFLASSNQPLTAVDGFRRDLLYRL
NPASLHVPPLAARRGDIPLLFRHFLTLAAARASLPVPEVAAETLMALSARDWPGNVRELA
NEAERYVLGLQAPGDAPPLSLAQRVEAFERAQIAAALSAHHGALRETYESLGLARKSLYE
KMQKYGLKREDFGGDLPD
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgaatgtgctgttgatagatgacgaggaggatatccgcgcctcgctcagccaaacgctg
gaacttgccggcttttctgtgaccgcctgcgcgcgggccgaacgcgcgctcgacctggtc
gatgccgcgtttgacggggttgtcgtgtcagacatccggatgccgcgcatggatggcatg
gctttgcttgaagcgattgcggcgcgcgatgctgaactgcccgtggtgctgatcaccggc
aatgccgatgtggcgctggcggtggcggccatgcgcgccggggcgcatgacttcattgaa
aaaccgttcgagcccgcccgcctggttgaaattgcccgccgcgccgtggccctgcgcaag
ctgacgctggaaaaccgcagcctgcggcgcgtgctggagggcgatgatgcgctggcggcg
cgcatcagggggcgcagcgcggaaatcatcgacctgcgccgccagattgcgctgctcgca
cggcacgataccgatgtgctgatcgagggggaaaccggcaccggcaaagagcttgtcgca
cgggccttgcacgagctttcggcgcgggccgggcagccctttgtggcgatcaacctggca
tcattgcccgcagccagcatcgaatccgagctgttcggccatgtggcgggcgcctttccc
ggcgcattgcgcgacaggcgtggccggtttgaacatgcgcgcggcggcacgctttacctg
gatgagatcggcgcattgccccctggcttgcaggtcaaactgctgcgcgtggttgaagaa
cgcgccatcaccccgctgggcggtaacgagacgattgcgctcgatgtgcgctttctggcc
agttccaaccagccgctgaccgcggttgacgggttccggcgcgacctgctttaccggctc
aaccccgccagcctgcatgtgccgccgcttgccgcgcggcgcggcgatattccgctgctg
tttcgtcatttcctgacccttgccgccgcccgcgccagcctgcccgtgcccgaggttgcc
gccgaaacgctgatggccctgtcggcgcgcgactggccgggaaatgtgcgtgaactggcg
aatgaggctgaacgctatgtgctgggtctgcaagcgccgggcgatgcgcccccgctgagc
ctggcgcaacgcgtggaagcctttgagcgtgcgcagatcgcggcggccttgtcggcccat
cacggggcgctgcgcgaaacctacgaatcccttgggctggcacgcaagtcgctttacgag
aaaatgcagaaatacgggctgaagcgcgaagattttggcggcgacctgccggactga

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