Abyssibius alkaniclasticus: LGT41_0015040
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Entry
LGT41_0015040 CDS
T08825
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aalk
Abyssibius alkaniclasticus
Pathway
aalk03030
DNA replication
aalk03430
Mismatch repair
aalk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGT41_0015040
03430 Mismatch repair
LGT41_0015040
03440 Homologous recombination
LGT41_0015040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalk03032
]
LGT41_0015040
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0015040
Enzymes [BR:
aalk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGT41_0015040
DNA replication proteins [BR:
aalk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGT41_0015040
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGT41_0015040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_19
AAA_14
AAA_16
TIP49
ResIII
AAA_24
AAA_18
SLFN-g3_helicase
Mg_chelatase
PIF1
AAA_assoc_2
Rad17
Glyco_tranf_2_5
nSTAND3
DUF6087
TsaE
Motif
Other DBs
NCBI-ProteinID:
UPH71078
LinkDB
All DBs
Position
complement(3021580..3023331)
Genome browser
AA seq
583 aa
AA seq
DB search
MTDTTPSYRVLARKYRPETFADVIGQDALVRTLKNAFEADRIAHAFIMTGIRGTGKTTTA
RIIAKGLNCIGPDGTGKPTISPCGQCEPCLAIAEGRHVDVIEMDAASNTGVQNIRDAIIE
GVAYRAASARYKVFIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSR
CQRFDLRRIEPEDMLALLRKIAKAEGAEIAEDALALITRAAEGSARDATSLLDQAISHGA
GETTVAQVRAMLGLADRGRVLDLFDLIVKGDAAGALGELAGQYADGADPMAVLRDLAEIT
HWVSVLKITPEAINDPTIGADERDRGQTMSAALHMRVLTRMWQMLLKALEEVASAPNAMM
AAEMAIIRMTHVADLPSPEELVRRLADAPPPPSPPSGGGAGGGGGGGGGGGGGAAPRGAF
NGANLSIVADMAEAPDPLARYAQFEDVITLIRTRRDMQLLVEVETHLRLVRYAPGRIEFA
QGNDARADLAQRLSQRLQSWTGARWGVSVVAESGVDAAPTIAEIRAQTRADLTAKIMEHP
LVAAALAAFPGAEMRPPSIDTPLEDLAEAEDMGAENWDPFEED
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccaccccaagttaccgcgtgcttgcgcgcaaataccgccccgaaaccttt
gccgatgtgatcgggcaggatgcgctggtgcgcacgctgaagaacgcgttcgaggccgac
cggattgcccatgccttcatcatgaccggcattcgcggcaccggcaaaaccaccacggca
cggatcattgcaaaggggctgaactgcatcggccccgatggcaccggcaagcccacaatc
tcgccctgcgggcaatgcgagccctgccttgccattgccgaaggtcgccatgtcgatgtg
atcgagatggacgccgcctccaacaccggcgttcagaatatccgcgatgcgattatcgag
ggcgtggcctatcgcgccgcctcggcccgctacaaggtgttcatcatcgacgaggtgcat
atgctgtcgacctcggccttcaatgcgttgttgaaaacgctggaagagccgcccgcgcat
gtgaaatttatcttcgccacaaccgaaatccgcaaagtgccggtgacggtgctttcccgc
tgccagcggttcgatctgcgccgcatcgagcccgaagacatgctcgccctgctgcgcaag
atcgccaaggccgaaggcgctgaaattgccgaagacgcgctggcgctgatcacccgtgct
gctgaaggttcggcgcgcgatgcaacttcgctgctcgatcaggccatcagccacggggcg
ggggaaaccacggtggcgcaggtgcgcgccatgcttggccttgccgatcgtggccgcgtg
ctggacctgttcgacctgatcgtgaagggcgatgcggcgggtgccctgggcgagcttgcc
ggccaatatgccgatggcgccgacccgatggccgttttgcgcgatctggccgaaatcacc
cattgggtttcggtcctcaaaatcacacccgaggcgataaacgacccgacgataggtgcg
gatgagcgggaccgtggccagaccatgtcggctgctttgcatatgcgcgtgctgacccgc
atgtggcaaatgctgctcaaggcgctggaggaggtggccagcgcgcccaatgcgatgatg
gccgctgaaatggccattatccgcatgacccatgtcgccgatctgcccagccccgaggaa
cttgtgcgccgtctggccgatgcgccaccgcccccaagcccgccatccggtggtggcgcc
ggtggcggtggcggtggtggcggcggtggtgggggtggcgctgcgccgcgcggggcgttc
aacggcgcgaatctgtccatcgttgccgatatggccgaggcacccgacccgctggcgcgc
tatgcgcagtttgaagatgtcatcaccctcatccgcacgcggcgggacatgcaactgctg
gtcgaggttgaaacccatttgcggctggtgcgctatgcgccggggcggattgaatttgca
cagggcaatgatgcccgcgccgaccttgcccaacggctttcccagcggctgcaaagctgg
accggggcgcgctggggcgtttcggttgtggctgaaagcggcgtcgatgcggcgcccaca
atcgccgagatccgcgcgcaaacccgggccgacctgacagcgaagatcatggaacatccg
cttgtggccgcggccctggccgcttttcccggtgccgagatgcgcccgccgtcgattgac
actccgcttgaagatttggccgaggccgaggatatgggtgcagagaactgggacccgttc
gaagaagactaa
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