Aeromonas allosaccharophila: I6G90_04395
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Entry
I6G90_04395 CDS
T07074
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aall
Aeromonas allosaccharophila
Brite
KEGG Orthology (KO) [BR:
aall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aall03016
]
I6G90_04395 (rnd)
Enzymes [BR:
aall01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
I6G90_04395 (rnd)
Transfer RNA biogenesis [BR:
aall03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I6G90_04395 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QPR55677
UniProt:
A0A7T2PHB1
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All DBs
Position
998785..999897
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AA seq
370 aa
AA seq
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MQYQLITQQADFEHYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHLALLDPLTLD
LSALWQRLSREGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
NEFLGVELEKDQARTDWLARPLTSRQLEYAAADVFYLMPLYEKVMAKLRESGKFAWFEQE
CQNHSARKTQGSDPRQAYLEIVNAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPTSMRDLNELGLAPIEIKIHGKRMLDIVARAQQSDPDSWPEPIRRLVDFPQ
YKAELKRIKAMVEEKAKASNIPPELIASKKIIHQYFTWSWRMNDEERARSDKPMLLQGWR
HELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaacttatcactcagcaagccgactttgagcactatctcgcttctctggcc
gacgttcccctggctatcgatactgaattcgttcgcacccgtacctactacccccagctt
ggcttgttccagatctatgacggcgagcatctggcgttgctggatccgctgacgctggat
ctctccgccctctggcagcgactgagccgggaagggcagatcgccatcctgcacgcctct
ggcgaagatctggagcttatccagcatcaggcaggccacctgcctaaccagatgcacgac
acccagctggctaccgcgttcctcgggtacggcgtctcggtcggctttggtgcgctggtt
aacgaatttctcggggtcgagctggaaaaagatcaggcgcgcaccgactggctggcccgc
cccttgacctcccgccagctcgaatacgcggcggcggatgtgttctacctgatgccgctc
tacgagaaggtgatggccaaactgcgggaaagcggcaagtttgcctggttcgagcaggag
tgtcagaaccactccgcccgcaagactcagggtagcgatccccgtcaggcttatcttgaa
atcgtcaacgcctggcaactggggcgccgcgagctcgccatcctgcgcgagctggccgcc
tggcgtcagcaagaggcggtacgccgcgatctggccctcaacttcgtggtcaaggagctg
catctgttcaaggtggcggagcgtcgtccgacctccatgcgtgacctcaacgaactgggg
ctggcccctatcgagatcaagatccatggcaagcggatgctcgatatcgtcgcccgcgcc
cagcagagcgatcctgacagttggcccgagcccattcgccggctggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaagagaaggccaaggccagcaat
attccgcccgagctgattgccagcaagaagatcattcaccagtacttcacctggagctgg
cggatgaatgacgaagagcgggcccgcagcgacaagccgatgctgctgcaagggtggcgt
catgagctggtcggtcacctgctggcacaataa
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