Aeromonas allosaccharophila: I6G90_05425
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Entry
I6G90_05425 CDS
T07074
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aall
Aeromonas allosaccharophila
Pathway
aall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G90_05425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aall03019
]
I6G90_05425
03400 DNA repair and recombination proteins [BR:
aall03400
]
I6G90_05425
Enzymes [BR:
aall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6G90_05425
Messenger RNA biogenesis [BR:
aall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G90_05425
DNA repair and recombination proteins [BR:
aall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G90_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
TniB
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QPR55867
UniProt:
A0A7T2UNU4
LinkDB
All DBs
Position
1230043..1231956
Genome browser
AA seq
637 aa
AA seq
DB search
MIPSLLNQYFGFSTLRPGQEAVISRVLAGQSAAAIFPTGSGKSLCYQLPALAMPHLTLVI
SPLLALMHDQLAFLKSKGISAATLDSSQSPEESRRVMQQALDGQLKILMISVERLKNERF
RRLIEQVPLSLLVVDEAHCISEWGHNFRPDYLKLPSYRHDLKIPQVLLLTATATPAVIQD
MQTKFGIEPEGVVVTGFYRSNLDLAVIPLAPDARDGWLARTLTQEPAAPTIVYVTLQHTA
EACAEQLIGQGINARAYHAGLDSALRSQIQHDFMAGKVDCIVATIAFGMGIDKADIRRVI
HYDLPKSIENYSQEIGRAGRDGQPSRCIVLANQSQLPVLENFVYGDTPDLSAILQLLAII
GQSGAEWEFTLLRLSNDTNIRQLPLKTLLVYLEMAGIITPAYSYYADYRFKFVLDKGEIV
SRFNPDRRQFLEQLFACAPQARSWCTMDFDALWQGYQGERQRAVAALDYLQQQGWIELES
KQMTEVYRITRQGWDCEQEANALHALFLQKEQSELARLQAMLDFFTSDECLSHRLARYFA
DEVAPVHCGHCSVCRGEVAHLPPLPSLTMPNEAGIRAWCDPLIAKTGSVDARVLARFLCG
IATPLTSRVKAKSLAGAGQLAAHPFARVLTAVQQAYP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatcccatccctgctcaaccaatactttggtttctccacactcaggccaggccaggag
gcggtgatcagccgggtgctggctggccagagtgccgccgcaatctttcccaccggctcc
ggcaagtccctctgctatcagctgcctgccctcgccatgccccacctgaccctggtgatc
tcgccgctgctggcgctgatgcacgatcagctcgccttcctcaaaagcaagggaataagc
gccgccaccctcgactcgagccaaagtccggaggagagccgcagagtgatgcagcaagcg
ctggatgggcagctcaaaatcctgatgatctcggtggagcggctcaagaacgagcgcttt
cgccgccttatcgaacaagtgccgctctcgctgctggtggtggatgaggcgcactgtatt
tcggagtggggccacaactttcgccccgactacctcaaactgccgagctatcgccatgac
ctgaagatcccgcaggtgttgctgctgaccgctaccgccacacccgcggttattcaggat
atgcagaccaaattcggcatcgagcctgaaggagttgtagtcaccggtttctaccgttcc
aatcttgatctggcggttatccccctggcgcccgacgcgcgggacggctggctcgcacga
acgctaacgcaagagccggcggcccccaccatcgtctacgtcaccttgcagcacaccgcc
gaagcctgcgccgagcagcttattgggcaagggatcaatgcccgcgcctaccatgccgga
ctcgactcggcgctgcgcagccagatccagcacgacttcatggctggcaaggtggattgc
atcgtcgccaccatcgcctttggcatggggatcgacaaagcggatatccggcgggtcatt
cactacgatctgcccaaatccatcgagaactacagccaggagattggccgcgccgggcgg
gatggtcagccctcgcgctgtatcgtgctggcaaaccagagccaactgccggtgctggag
aacttcgtctacggcgataccccggatttgagtgccatcctccagctgcttgccatcatc
gggcagagcggggccgagtgggaattcaccctgctgcgcctctccaacgacaccaatatc
cgtcagttaccgctgaaaaccctgctggtctatctggagatggcgggcatcatcaccccg
gcctacagctactacgccgactaccgcttcaagtttgtgctggataaaggcgagatagtg
agtcgcttcaatccggatcgtcgccagtttctggagcaactgttcgcctgcgccccgcaa
gcacgcagctggtgcaccatggactttgacgccctctggcagggctatcagggagagcgg
cagcgggcggttgcggcgctcgattacctgcaacagcaaggctggatagagctcgaaagc
aagcagatgaccgaggtctaccggatcacccgtcaggggtgggactgcgagcaggaggct
aacgctctccatgccctgttcctgcaaaaagagcagagcgagctggccagactgcaagcc
atgctcgactttttcacctcggatgagtgcctgagtcaccgcctcgcccgctattttgcc
gatgaggtggcgccggttcattgtggccactgttcggtctgtcgcggcgaggtggcgcat
ctcccgcccctgccctcactgaccatgccaaacgaggcggggatccgtgcctggtgtgac
ccgctgattgccaagactggttcagtggatgcgcgtgtcctggcccgtttcttgtgcggt
atcgccacaccgctgaccagccgggtcaaggccaaatcgctggcgggtgcaggccaactg
gccgcccacccgtttgcacgcgtcctgacggcagtgcaacaagcctacccttga
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