Aeromonas allosaccharophila: I6G90_05530
Help
Entry
I6G90_05530 CDS
T07074
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aall
Aeromonas allosaccharophila
Brite
KEGG Orthology (KO) [BR:
aall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aall03019
]
I6G90_05530 (hrpA)
Enzymes [BR:
aall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I6G90_05530 (hrpA)
Messenger RNA biogenesis [BR:
aall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I6G90_05530 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
AAA_23
ResIII
nSTAND3
AAA_30
PhoH
NTPase_1
WHD_HA2
NACHT
TsaE
T2SSE
AAA_11
SLFN-g3_helicase
DUF6145
nSTAND_NTPase5
AAA_25
ABC_tran
SRP54
Motif
Other DBs
NCBI-ProteinID:
QPR55887
UniProt:
A0A7T2PHP2
LinkDB
All DBs
Position
complement(1256512..1260438)
Genome browser
AA seq
1308 aa
AA seq
DB search
MSLSIEALRRRLSACMNLDARRLSSRLHGVKKLPEGKQAAVLETIAADLDAAQARYQARL
AGVPRVTYPDNLPVSQKQAEIAKAISEHQVVIIAGETGSGKTTQIPKICLALGRGVKGFI
GHTQPRRLAARTVAARIAEEMESELGHYVGYKVRFTDQVSEQTHIKLMTDGILLAEIQND
RMLTQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPQRFSRHFNKAP
VIEVSGRTYPVEVRYRPLFADKKSGDKSADKSEALEERDELQGIFDAVEELAREGLGDIL
IFMNGEREIRDTADALRKLNLRDTEVLPLYARLSNAEQNKVFQQHAGRRIVLATNVAETS
LTVPGIRYVIDPGTARISRYSWRTKVQRLPIEPVSQASANQRKGRCGRVADGICIRLYSE
EDFNNRPAFTDPEILRTNLASVILQMLALGLGNMEAFPFVEPPESRHIKDGLTLLKELEA
VKELPATRDQEPKLQLTETGRQLSRIPLDPRLAKMVITAAQTGCLSEVMVITAGLSIQDP
RERPMEKKQAADEQHRRFEDKDSDFFAFVNLWNYLKEQQDLLGSNPFRRMCQKEFLSYLR
VREWQDIHFQLRQTVKELGFKANHEPADFKTVHCALLTGLLSHIGNKDLEKPEFLGARNG
RFHLFPASGLFKKPPKWVMAAELVETSRLYARINARIEPEWVEPLAGHLIKLHHSDPHWS
KKNGAVMAKEKVTLYGLTLVNERTINFSRLDPALCRELFIRRALVEGDFETRHRFFSDNR
KLLAEVEALEHKSRRRDILVDDEDLFRFYDARLPEEVISARHFDKWWKEAQKQDPELLNF
EKEMLMKGDAAHISDLDYPNFWQQGRLKLKLSYQFEPGEAADGVTLHIPLPLLNQVEVKG
FEWLIPGLRHELLVALIKSMPKPMRKNFVPAPNYADALLATLNPEQGPLLDEMERQLRRM
TGVTVPRESWDWNAVPDHLKLTFRVVDDKHKKVAEGKDLEALKESLRGKVQETLSQVADD
DIEQSGLTLWSFGELPQEYSQKRGGFEVKAYPALVDEKDSVSIQLVESPVAQQQLMWAGQ
RRLVLLNVPSPIKYLQEKLPNKAKLGLYFNPFGKVAELIDDCIACGCDKLIEQHGGLAWD
EAGFEALKEYVRAELNDAVVEVAKQVEAVLTLSHEIKKRLKGKMQLDTAFAMSDIQLQLS
NLIHKGFVTETGWQRLPDLLRYLRAIERRLEKLAIDPNRDRVYMLKVQSVESEYKALLAK
IPKSQLIPAEVANIRWMIEELRVSFFAQNLGTPYPVSDKRVLNAIAQC
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
ttgtctctctctatcgaggcgctgcgccgccgtctctctgcctgcatgaatctcgacgcc
cgccgcctctccagccgtctgcacggggtcaagaagctacctgaaggcaaacaggccgcc
gtgctggagaccatcgccgccgatctggatgccgcgcaagcgcggtatcaagcccgtctg
gccggtgtacccagggtcacctatccggacaacctgccggtcagccagaagcaggcggag
atcgccaaggcgatcagtgagcatcaggtggtgatcattgcgggcgaaaccggctcgggc
aaaaccacccagatccccaagatctgtctggcgctggggcgcggggtgaagggctttatc
ggccacacccagccgcgtcgtctggcagcccgcaccgtggcggcccgtattgccgaggaa
atggagtccgaactcggccactacgtgggttacaaggtgcgctttaccgatcaggtgagc
gagcagacccacatcaagctgatgactgacggtattctgctggccgagatccagaatgac
cggatgctcacccagtacgacaccatcatcatcgatgaggcccacgaacgcagcctcaac
atcgacttcattctgggctacctcaagcaactgctgccacggcgccccgatctcaaggtg
atcatcacctcggccaccatagacccgcagcgtttctcccgtcatttcaacaaggcgccg
gtgatcgaggtctccggtcgcacttatccggtcgaggtgcgctatcgtccgctgtttgct
gataaaaagagcggcgacaagagcgcagacaagagtgaggcgctggaggagcgcgacgag
ctgcaggggatcttcgatgcggtggaagagctggcccgcgaagggttgggggatatcctc
atcttcatgaatggcgagcgggagatccgtgatactgccgatgccctgcgcaagctcaac
ctgcgcgataccgaggtgctgccgctctacgccagactctccaacgccgagcagaacaag
gtgttccagcaacatgccggtcggcgcatcgtgctggccaccaacgtggcggagacctcg
ctgacggtgccgggcattcgttacgtcatcgatccgggtaccgcccgtatcagccgctac
tcatggcgcaccaaggtgcagcgcctgcctatcgagccggtctcccaggccagtgccaac
cagcgtaaagggcgttgcggccgggtggcggacggtatctgtatccgcctctactccgag
gaggatttcaacaaccgcccggcctttaccgaccccgagatcctgcgcaccaacctggca
tcggtcatcctgcagatgctggcgcttggccttggcaatatggaggccttcccgttcgtc
gagccgccggagtcacgccatatcaaggatggcctgaccctgttgaaagagctggaggcg
gtcaaagagctgcccgccacccgggatcaggagccgaaactgcagttgaccgaaaccggt
cgccagctctcgcgtatcccccttgatccacggcttgccaagatggtgatcacggcggcg
caaaccggctgtctgagcgaagtgatggtgatcactgcgggcctcagtattcaggatccc
cgcgagcggcccatggagaaaaagcaggccgccgacgagcaacacagacgctttgaagac
aaggattccgacttcttcgccttcgttaacctctggaactacctgaaagagcagcaagat
ctgctcggcagcaacccgttccgccgcatgtgccagaaggagttcctctcctacctgcgg
gtgcgcgaatggcaggacattcatttccagctgcgccagacggtcaaagagctgggtttt
aaagccaaccatgaaccggcggatttcaagacggtacattgcgcgctgctgaccggcctc
ttgagccacatcggcaacaaggatctggaaaagcccgagttccttggcgcccgcaacggc
cgcttccacctgttcccggcatcgggtctgttcaagaagccgcccaagtgggtgatggcc
gcagaattggtagagacctcgcgtctctacgcccgcatcaacgctcggattgagccggaa
tgggtggagccgctggcgggtcacctcatcaagctgcatcacagcgacccccactggtcg
aagaaaaatggcgcagtgatggccaaggagaaggtgacgctttatggcctgacgctggtc
aatgagcgcaccatcaacttcagccgcctcgatccggccctatgccgcgagctgtttatt
cgccgcgctctggtggagggggatttcgagacccgccaccgcttcttcagcgataaccgc
aagctgttggccgaggtggaagcgctggagcacaaatcccggcggcgcgacatcctggtg
gatgacgaggatctgttccgcttctacgatgcccgtttgccggaggaggtgatctccgcc
cgccacttcgataagtggtggaaagaggcgcaaaagcaggatcccgagctactcaacttc
gaaaaagagatgctgatgaagggggatgccgcccatatcagcgatctcgactaccccaac
ttctggcagcaggggcgactcaagctcaagctgagctaccagtttgaaccgggggaggcc
gccgatggcgtaaccctgcatattccgctgccgctgctcaatcaggtggaagtgaaaggg
tttgagtggctgatccccgggctgcgccatgagctgctggtcgccctcatcaagtcgatg
cccaagccgatgcgcaagaacttcgtgccggcaccgaactacgccgacgcgctgctcgcc
accctcaaccccgagcaggggccgctgctggacgagatggagcgccagctacgacgcatg
accggtgtcactgtacctcgcgaatcctgggactggaatgcggtgcctgatcacctgaaa
ctcaccttccgggtggtcgatgacaagcacaagaaggtggcggaaggcaaagatctggag
gcgctgaaagaatccctgcgcggcaaggtgcaggagaccctctcccaggtggctgacgac
gatatcgagcagtccggcctcaccctgtggagctttggcgagttaccgcaagagtacagc
cagaagcgcggtggttttgaagtgaaagcctatccggcgctggtggatgagaaagattcg
gtctccatccagttggtagaaagcccggtggcccagcaacagctgatgtgggccggccag
cgccgactggtgctgctcaatgtgccatctcccattaaatacctgcaggagaagttgccc
aacaaggccaagctggggctctatttcaacccctttggcaaggtggccgaattgattgac
gattgtatcgcctgtggctgcgacaagctgatcgagcagcatggcgggctggcctgggac
gaagccggtttcgaggcgctcaaggagtacgttcgcgccgagctcaacgatgcggtggta
gaggtggccaagcaggtggaagccgtactgaccctctcccatgagatcaagaagcggctc
aagggcaagatgcagctcgacaccgcctttgccatgtcggatatccagctgcagctgagc
aatttgatccacaagggcttcgtcacagagactggttggcagcgactgcctgacttgctg
cgctatctgcgtgccatcgagcgacgtctggagaagctggccatcgatcccaatcgggat
cgggtctacatgctcaaggtgcagagtgtggagtccgagtacaaggcgctgctggccaag
atccccaaatcccagctgatcccggccgaagtagccaatatccgctggatgattgaggag
ctgcgggtgtcgttctttgcccagaatctggggactccgtatccggtctccgataaacgg
gtgcttaacgccatcgctcagtgctaa
DBGET
integrated database retrieval system
