Aeromonas allosaccharophila: I6G90_06540
Help
Entry
I6G90_06540 CDS
T07074
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
aall
Aeromonas allosaccharophila
Pathway
aall03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6G90_06540 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aall03400
]
I6G90_06540 (uvrB)
DNA repair and recombination proteins [BR:
aall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6G90_06540 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6G90_06540 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
Kinesin
Microtub_bd
AAA_22
DUF8810
Motif
Other DBs
NCBI-ProteinID:
QPR56068
UniProt:
A0A7T2PHU5
LinkDB
All DBs
Position
complement(1474511..1476523)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKLFKLASQFQPAGDQPAAIAQLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDVINQRDILRRLAELQ
YTRNDMAFQRGTFRVRGEVIDIYPAESDKLALRVELFDEEVERLSQFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIEHIKEELRSRREQLLSLNKLVEEQRISQRTQFDMEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PEIEVRPVTTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTEYLAEHDVKVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMKVAIEETERRRALQHAHNLKHGITPKGLNKSVGDVMDMG
GSRSAGKAGKGSRKAAEPQGEYHARSASEIAKEIKRMEEQMFQHARDLEFEQAAALRDQI
QRLRSELIES
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattgttcaagttagccagccagtttcaacccgccggggatcagcccgcggcg
attgcccagctgctggatggcatcgagtcggggctggcccaccagaccctgctcggggtg
accggttcgggcaagaccttcaccatggccaatgtcatcgctaccctgaaccgcccgacc
atgatcctggcacccaacaagaccctggccgcccagctctatggcgagatgaaggagttc
ttccccgacaacgcggtggagtatttcgtctcctactacgactattaccagcctgaagcc
tatgtgccgaccaccgacacctttatagagaaggatgcctccatcaacgatcacatcgag
cagatgcgattgtcggccaccaaggcgctgctggagcggcgcgatgtggtgatcgtggcc
tctgtgtcggccatctatggtctgggggatccccaggcctatctcagcatgatgctgcac
ctgaaagtgggggatgtgatcaaccagcgggatattctgcgccgcctcgccgagctgcaa
tacacccgcaacgacatggcgtttcaacgcggcaccttccgggtgcgtggcgaagtgatc
gacatctatcctgccgagtcggacaagctggcgctgcgggtcgagttgtttgatgaggag
gtggagcggctctcccagttcgatcccctgactggcgccatcgagcagacggtggtgcgc
tacaccatctaccccaagacccactacgccaccccgcgcgagaccattctgggggctatc
gagcatatcaaggaggagctgcgcagccgtcgcgagcagctgttgtccctcaacaaattg
gtggaagagcagcgcatcagccagcgcacccagttcgacatggagatgatgcaggagctg
ggctactgctccggtatcgagaactacagccgctacctctccggccgggcgccgggggag
ccgccgcccaccctgtttgactacctgccgggggatggcctgctcatcatcgatgaatcc
cacgtcacggtgccgcagatcggcgccatgttcaaaggggaccgctcccgcaaggagacc
ctggtggagtacggcttccggctcccctcggcgctcgacaaccggcccctcaagttcgac
gaattcgaggcgctgatgccgcagacggtgtttgtctcggcgacccccggcccctacgag
ctggagaagtccggtggcgatgtggtgcagcaggtggtgcgccctaccggcctgctcgat
ccggagatcgaggtgcgcccggtgactacccaggtggacgacctgctctccgagatccgc
aagcgggtcgcggtggaggagcgagtgctggtcaccactctgaccaagcggatggcggaa
gacttgaccgagtatctggcggagcacgacgtcaaggtgcgctacctccactccgacatc
gatacggtcgagcgggtggagatcatccgcgatctgcgccttggcaagttcgatgtgctg
gtgggcatcaacctgttgcgggaaggtctcgacatgccggaggtgtcgctggtggcgatt
ctggatgcggataaagagggcttcctgcgctcgacccgctcgctgatccagaccatcggc
cgcgcggcgcgcaacctcaacggcaaggtcattctctacggcgataccatcaccaactcg
atgaaggtggcgatcgaggagaccgagcggcgccgcgccctgcaacatgcccacaacctc
aagcacggcatcacccccaaggggctcaacaagtcggtgggggacgtgatggacatgggg
ggcagccgcagtgcaggcaaagcaggcaaggggagtcgcaaggccgccgagccgcaaggg
gagtaccacgcccgctcagccagcgagattgccaaagagatcaaacggatggaggaacag
atgttccagcatgcccgggatctggagttcgaacaggcggcggcactgcgggatcagatc
cagcggctgcgcagcgagttgatcgagtcatga
DBGET
integrated database retrieval system
