Aeromonas allosaccharophila: I6G90_07330
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Entry
I6G90_07330 CDS
T07074
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aall
Aeromonas allosaccharophila
Pathway
aall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G90_07330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aall03019
]
I6G90_07330
03009 Ribosome biogenesis [BR:
aall03009
]
I6G90_07330
Enzymes [BR:
aall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6G90_07330
Messenger RNA biogenesis [BR:
aall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G90_07330
Ribosome biogenesis [BR:
aall03009
]
Prokaryotic type
rRNA helicases
I6G90_07330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
CMS1
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QPR56206
UniProt:
A0A0T6V320
LinkDB
All DBs
Position
complement(1644416..1646326)
Genome browser
AA seq
636 aa
AA seq
DB search
MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTA
AFALPLLSRLEAGNRNTQVLVLAPTRELALQVAEACQRYAKHMPDFHVLPIYGGSSYETQ
TRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMEQCP
ATRQVALFSATMPDQIRRVAQKHLKQPKEIKIITKTSTAPTIRQRYWQVTGLHKLDAMTR
LLEVEPYEAVLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDI
LIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLR
AIEHATRQAIEPMKMPSTEDINQHRLTKFKERIRETMMGEELEIYVNLVNELIEEDSADP
LELAAALAKLVQGDQPLLLDDSIPDPLLNASNDRGGRDFDRRDGGRDFGARDFGDRGDRP
ARRMPSLEPRPLKDNPDVEMERYRVDVGAHHGVKPGQIVGAIANEANIESRFIGNIDIAD
DFSTVDLPKGMTADVLEVIKKARVCQRPLQITRYTEVPAGSNTAPRPPRSDRPFNKERPF
NKDRRPQGDRPFNKSGERREGGFNKDRKFSGKRRES
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccgaacaactgcccctttttagtgagcttggactggccgcgcctgtattg
aaagcgctgcaagacgtgggctatgagcgcccgtcaccgatccaggccgcagcaattccc
cacctgatggcgggacacgatctgctggggcaggcgcaaaccggtacagggaagaccgct
gcttttgccttgcctctgttgtctcgtctggaagctggtaaccgcaacactcaggttttg
gtgctggctccgacccgtgaactggccctgcaagttgccgaggcgtgccaacgttacgcc
aagcacatgcctgacttccatgtcctgccgatctacggcggctcctcttacgaaacccag
acccgcgccctgcgtcgtggtgcccaggttgtcgtcggtacccctggtcgtgtgatggat
ctgatccgtcgcaagaacctggacctctccggcctgaaagccctggtactggacgaagcc
gatgaaatgctgcgtatgggcttcatcgacgacgtggactggatcatggagcagtgcccg
gccacccgtcaggttgccctgttctccgctaccatgccggaccagatccgtcgcgttgcc
cagaagcacctgaagcagccgaaagagatcaagatcatcaccaagacgtccactgcaccg
accatccgccagcgttactggcaggtaaccggtctgcacaagctggacgccatgacccgt
ctgctggaagtcgaaccgtacgaagccgtactggtcttcgtgcgcaccaagaatgctgcc
gaagagctggctggcaaacttgccgctcgtggccacgcttgtgaagcgctgcacggtgac
atcccgcagaaactgcgtgagcgtaccgttgacaagctgcgtcaaggccagctggacatc
ctgatcgccaccgacgttgtcgctcgtggtctggacgttgagcgtatcactcacgtagtg
aactacgacattccgtacgacaccgaatcctacgtacaccgtatcggccgtaccggtcgt
gccggtcgtaaaggtgaagccatcttgttcgttgctccccgtgagcgtcgcatgctgcgc
gccatcgagcacgctactcgtcaggccatcgagccgatgaagatgccgagcaccgaggac
atcaaccagcaccgtctgaccaagttcaaagagcgcatccgggaaaccatgatgggtgaa
gagctcgagatctatgtgaacctggttaacgagctgatcgaagaagattctgccgatccg
ctggagctggctgccgcattggccaaactggtacagggcgaccaaccgctgctgctggat
gactccatcccggatccgctgctgaatgccagcaacgatcgtggtggtcgtgatttcgac
cgtcgtgacggtggccgcgatttcggtgcccgtgacttcggcgaccgtggtgatcgtcct
gcccgtcgcatgccgtccctcgagccgcgtccgctgaaagacaacccggatgtggagatg
gagcgttaccgcgtagacgtgggtgcccatcacggcgtcaagccgggccagattgttggc
gccatcgccaacgaagcgaacatcgagagccgtttcatcggtaacatcgacatcgccgat
gacttctccaccgtcgatctgccgaaaggcatgaccgccgatgtactggaagtgatcaag
aaagcccgtgtttgccagcgtccgctgcagatcactcgctacaccgaagtgccggctggc
agcaacactgctccccgtcctccgcgtagcgatcgccccttcaacaaggagcgtcctttc
aacaaggatcgccgtccccagggtgaccgcccgttcaacaagagcggtgagcgccgtgaa
ggtggcttcaacaaagatcgcaaattcagtggcaagcgtcgcgaaagctga
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