Aeromonas allosaccharophila: I6G90_12410
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Entry
I6G90_12410 CDS
T07074
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
aall
Aeromonas allosaccharophila
Brite
KEGG Orthology (KO) [BR:
aall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aall03019
]
I6G90_12410 (hrpB)
Enzymes [BR:
aall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I6G90_12410 (hrpB)
Messenger RNA biogenesis [BR:
aall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I6G90_12410 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
HA2_N
AAA_22
DUF4037
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QPR53281
UniProt:
A0A7T2PCL4
LinkDB
All DBs
Position
2749159..2751606
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AA seq
815 aa
AA seq
DB search
MSQLPIVSVLPELFAALDSHSSVILQAPPGAGKSTLLPLELVRQNRLPGRIIMLEPRRLA
ARNIASFLARQLGEKVGERIGLRVRGESRTSAATRLEIVTEGVLTRMLQQDPELTGVSLV
IFDEFHERSLYADTALAFAIESQQGLRDDLKLLVMSATLDGMALERLLPDAPVVRSEGRG
FPIEYHYRPANRQQWLEPQIGAVVLEALAAHAGSLLVFLPGQGEIERLAQWLEGRLPDDV
ILAPLYGRLDMAAQQAAIEPAPAGRRKLVLTTNVAETSLTIEGISVVIDSGLERRASFDL
KSGVTRLETRQIAKSSATQRAGRAGRLGPGVCYRLWSSEVQERLAEQSPPDILTQELTGL
LLDAAQWGARVEDLPLLDMPPAAAVASAQRLLVALGAMKPEGEQQLTPAGRAMAAFGTHP
RLARMLLRARELESEGLTGIVADAAYLVALQEEDLRGSERLSVLFHRRQSALRQGAARWF
ERLGARPASAQGQWLGLLCALAWPDRIGKLRSGSRYQLSGGVSCDLVEGHPCQGQAALIA
IEMGQNDRGSRIFIAEPVELDELVRLLPELVSERQWFDWDEREERVRAERQQVLGELVLS
QRPLTELSDEQKGRCLLQGIRRKGLHVLPWDESSEGLLARLRCARDWLSDEGWPAMDDES
LLATLEQWLLPAVSGMTRLEQLKKLNLGDILRQSLPWPLPKRLDEALPSHFAAPTGSRVR
IRYQPGQAPVIPVRIQEMFGQGSTPCVADGRVPLVVELLSPAQRPLQITADLAAFWAGSY
EQVKKEMKGRYPRHYWPDNPLEAMPTRVTKKKMGM
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccagctccccatcgtttcggtattgcccgaactctttgccgccctcgacagccac
agcagcgtgatcctgcaggcgccgcccggtgcgggcaaatcgaccctgctgccgctggag
ctggtgcgccagaaccggttgcccggccgtatcatcatgttggagccaaggcgtctcgcg
gcgcgcaatatcgccagctttctggcgcgccagctgggggagaaggtgggcgagcgcatc
ggcctgcgggtacgcggcgagagccgcaccagcgcagcgacccggctcgagatcgtcacc
gaaggggtgctgacccggatgttgcagcaagaccccgagctgaccggcgtctcgctggtg
atcttcgatgagttccacgaacgcagcctgtacgccgataccgcattggccttcgccatc
gaaagccagcaagggctgcgcgatgacctcaaactcctggtgatgtctgccaccctggat
ggcatggcgctcgagcgcctgttgccggatgcccctgtagttcgctccgaggggcgcggt
tttcccatcgaatatcactaccgccccgccaatcgccagcagtggctggagccgcagatc
ggcgctgtggtgctggaggcgctggccgctcacgctggcagtctgctggtctttctgccg
ggacagggagagatcgagcgactggcgcaatggctggaagggcggctgccggacgatgtg
atcctcgcccccctctacgggcgcctcgatatggcggcccagcaggcagccatcgaaccg
gcacctgcgggccgccgtaagctggtgctcaccaccaatgtggcggagacctccctcacc
attgaggggatctcggtggtgatcgacagcgggctggagcgacgggcctcgttcgacctg
aaaagcggcgtcacccgactggagacccgccagatagccaaatcctccgccacccagcgg
gccggtcgcgccggtcgtctcggccccggcgtctgctaccggctctggagcagcgaggtg
caggagcggctcgccgagcagagtccgccagacattctcactcaggagctgaccggcctg
ctgctggacgccgcccaatggggtgccagggtggaagatctgccgctgctggacatgcct
cccgccgccgcggtggccagcgcccagcggctgctggtcgcccttggcgccatgaagccg
gagggtgagcaacaactcactcccgctggccgtgccatggccgccttcggtacccaccct
cgcctcgcccgcatgctgctgcgcgcccgcgagctggagtccgagggtctgacagggatt
gtcgccgatgccgcatatctggtggcgttgcaggaagaagatctgcgaggatcggagcgc
ctctctgtgctgttccaccgccgtcaaagtgccctgcgtcagggggcggcccgctggttt
gagcggcttggcgcccgccctgccagtgcgcagggtcagtggctcgggctactctgtgcc
ctcgcctggccggatcgcatcggcaaactgcgtagcggcagtcgctatcaactcagtggt
ggggtgagctgcgatctggtagaaggtcatccctgtcagggacaagccgcccttatcgcc
atcgagatggggcagaacgatcgcggcagccgcatctttatcgccgaaccggtcgagctg
gacgagctggtacgcctgctgccggaactggtgagcgaacggcagtggttcgactgggat
gaacgggaagagcgggtgcgcgccgagcgccagcaggtgttaggcgagctggtgctgagc
cagcgaccgctaaccgaactctctgacgagcagaaaggacgctgcctgctgcaggggatc
cgccgcaaggggctgcatgtgctgccgtgggacgaaagcagcgaagggctgctggcccgt
ctgcgctgcgcccgcgactggctgtccgatgaggggtggcccgcgatggatgacgagagc
ctgctggccacgctggaacagtggctgctgccggcggtgagcggcatgacccggctggag
cagctgaagaagctcaacctcggcgacattctgcgtcaatccctgccctggccgttgccc
aagcggctggacgaggcgctgccgagccactttgcggcgcccaccggcagtagggtgcgg
atccgctatcagccgggtcaggcaccggtgatcccggtgcgtattcaggagatgttcgga
caaggttcgaccccctgcgtggccgatggccgggtgccgctggtggtggagctgctctcc
cccgcccagcggccgctgcagatcaccgccgatctggctgccttctgggctggctcttac
gagcaggtgaaaaaagagatgaaggggcgctatccccgccactactggccggataatccg
ctggaggcgatgccgaccagggtcaccaagaagaagatggggatgtag
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