Aeromonas allosaccharophila: I6G90_16160
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Entry
I6G90_16160 CDS
T07074
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aall
Aeromonas allosaccharophila
Pathway
aall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G90_16160 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aall03019
]
I6G90_16160 (rhlB)
Enzymes [BR:
aall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6G90_16160 (rhlB)
Messenger RNA biogenesis [BR:
aall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G90_16160 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QPR53957
UniProt:
A0A0T6UHJ3
LinkDB
All DBs
Position
complement(3539957..3541246)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTTDKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
IAFLAATFNYLLTHPLTKPRLVNQPRAIIMAPTRELAVQIYNDADSIAASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQVEPEQMTGVRIKEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
DFTKGALDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHAIPVSKYDREALLDDVTPPKRVFRNRQPVNRNMRDRQGGGNSN
NRRRPPRKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacgaccgacaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacgcccatccaggcactgtctctg
ccactgctggtagaaggtcatgacctcgccggtcaggcccagaccggaaccggcaagaca
attgccttcctggccgcgacattcaactatctactgactcacccgctgaccaagccccgt
ctggttaaccaacccagagccatcatcatggcgcccacccgggaactggcagtacagatc
tataacgatgccgacagcatcgccgcttctaccggcctgaaactcggcctcgcctacggt
ggcgaaggttacgacaagcagctggccgtgctggagcaaggcgtcgacatcctgatcggc
accaccggtcgcatcatcgactacttcaagtccaaggtgatcgatctgagcaacattcag
gtcgtggtactggacgaagcggatcgtatgttcgatctcggcttcatcaaggacatccgc
ttcctgttccgccgcatgcctgccccgaccgaacgtctgagcatgctgttctccgccacc
ctctccctgcgggtgcaggagctggcctacgaacacatgaaccacccggaacatgtgcaa
gtcgagccggagcagatgaccggtgtgcggatcaaggaggagctgttctacccctccaac
gaagacaagatgttgctgctgctctccctgatggaagaggagtggccggaaaaagccatc
gtcttcgccaacaccaagcatgtctgcgaagacgtgcatgcctggctggagaacgacggc
caccgcgtcggtctgctgaccggtgacgtgccgcagaagaagcggatgaagatcctcgag
gatttcaccaagggtgcgctcgatattctggtcgccaccgacgtggccgcccgtggtctg
cacatccctgacgtgacccacgtcttcaactatgacctgcccgacgatgccgaagactat
gtacaccgtatcggtcgtaccggtcgtgccggcaagagcggtcactccatcagcctggcc
tgtgaagactatgccttcaacctgccggccatcgaggagtacatccaccacgccattccg
gtcagcaagtacgaccgcgaagcgctgctggatgacgtgaccccgccgaaacgggtgttc
cgcaaccgtcagccggtgaaccgcaacatgcgggatcgtcagggcggcggcaacagcaat
aaccgtcgtcgtccgccacgcaagagctaa
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