Aureimonas altamirensis: LUX29_02305
Help
Entry
LUX29_02305 CDS
T07762
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aalm
Aureimonas altamirensis
Brite
KEGG Orthology (KO) [BR:
aalm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aalm03016
]
LUX29_02305
Enzymes [BR:
aalm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LUX29_02305
Transfer RNA biogenesis [BR:
aalm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LUX29_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UHD46100
LinkDB
All DBs
Position
462897..463523
Genome browser
AA seq
208 aa
AA seq
DB search
MPIRVHKGDLPDLARYTGSVAIDTETLGLDTRRDRLCVVQLSPGDGSADVVQIAKGQTDA
PNLKALLADDSKVKIFHYARFDMAALYHAFGVMPGPVFCTKIASRLTRTYTDRHGLKDLT
KELIGVDLSKQQQSSDWAAETLSQAQIDYAASDVLYLHDLMGVLLQRLEREGRLDIARES
FRYLPTRARLDLLGWGEEDIFSHSVTRA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgcgtacacaagggcgacctgcccgaccttgcccgctataccggctccgtc
gccatcgataccgagacgcttggcctcgacacgcgccgcgacaggctgtgcgtggtgcag
ctttcgcccggcgacggatcggccgatgtcgtgcagatcgcgaaggggcagaccgacgct
cccaatctcaaggcgctcctggccgacgacagcaaagtcaagatcttccactatgcgcgg
ttcgacatggcggccctgtatcatgccttcggcgtgatgcccggaccggtcttctgcacc
aagatcgcctcgcgcctgacgcgcacctacacggaccgccacggcctgaaggacctcacc
aaggaactgatcggcgtcgatctttcaaagcagcagcaatcttcggactgggccgctgag
acgctgtcgcaggcgcagatagattatgctgcgtccgacgtcctttatctgcacgacctg
atgggcgtgctgctgcagcgcctcgagcgggagggcaggctcgacatcgcacgcgaatcc
ttccgctatctgccgacccgtgcgcgcctggacctcttgggatggggagaggaagatatc
ttctcccactccgtcacgcgggcctga
DBGET
integrated database retrieval system
