Aureimonas altamirensis: LUX29_08495
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Entry
LUX29_08495 CDS
T07762
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aalm
Aureimonas altamirensis
Pathway
aalm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LUX29_08495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalm03019
]
LUX29_08495
Enzymes [BR:
aalm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LUX29_08495
Messenger RNA biogenesis [BR:
aalm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LUX29_08495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UHD47202
LinkDB
All DBs
Position
complement(1751994..1753373)
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AA seq
459 aa
AA seq
DB search
MTQSQFDTLGLSEALLSAITKMGLVTPTPIQAKAMPAVLKGRDVLGIAQTGTGKTAAFAL
PVIDAILRKGGRAQPRSCKALFLAPTRELAVQIAENVKAYSAGTPMRHMTIFGGVSIRPQ
IETAARGVDIVIATPGRLLDMIDQKALTLSDVRHVVLDEADRMLDMGFVRDVMRIVKMLP
TERQSLLFSATMPASVEQLSGRILSDPIRVEVTPEVVTVEKIDQSVFLVPQKAKKNWLIQ
NLEKFDKTVVFTRTKHGANRLTTDLEKAGIEALAIHGNKSQAARQRALGEFHAGRLKVLI
ATDIVARGIHVDDVSHVVNFDLPEEAESYVHRIGRTARAGKSGIAITLCDPSERAKLRGV
EKLTGLRFDVQKSDFATDEALAASASEEAPRRGKSNGNRQGRPARSGQPGERHNAGGQHK
QGGDRRAANSAGEAKRDGANRAKRRRGTGQRGRPQAATA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaatcccagttcgacacgctcggcttgtccgaagcgttgcttagtgccatcacc
aagatgggccttgttacccctaccccaattcaggcaaaggccatgcccgccgtgctcaag
ggccgcgatgtcctcggcatcgcccagaccggcaccggcaagaccgccgcattcgccctt
cccgtcatcgatgccatcctgcgcaagggcggccgcgcgcagccgcgcagctgcaaggcg
ttgtttcttgctcccacgcgtgaactcgcggtgcagatcgccgagaacgtgaaggcttac
tccgccggcacgccgatgcgtcacatgacgatcttcggcggcgtctccatacgcccgcag
atcgaaaccgccgcacgcggcgtcgacatcgtcatcgcgacgcccggtcgcctgctggac
atgatcgaccagaaggcgctgaccctgtccgacgtacgccacgtcgtgctggacgaagcc
gaccgcatgctggacatgggcttcgtgcgcgatgtcatgcgcatcgtgaagatgctgccg
acggagcgccagtcgctgctgttctcggcaaccatgccggcctccgtcgaacagctctcc
ggacgcatcctgtccgaccccatccgggttgaggtgacgcccgaggtcgtgaccgtcgag
aagatcgaccagagcgtcttccttgtgccgcagaaggccaagaagaactggctgatccag
aacctggaaaagttcgacaagacggtcgtcttcacccgcaccaagcacggcgccaaccgc
ctgacgaccgaccttgagaaggccgggatcgaggcgctggccatccacggcaacaagagc
caggcggcacgccagcgcgcgctcggcgagttccatgccggccgtctcaaggttctgatc
gccaccgatatcgtggcgcgcggcatccatgtcgacgatgtcagccatgtggtgaatttc
gacctgcccgaagaggcggaaagctacgtgcaccgcatcggccgcacggcgcgtgccggc
aagtccggcatcgcgatcaccctgtgcgatccgtccgagcgcgccaagctgcgcggcgtc
gagaagctgaccggccttcgcttcgacgtccagaaaagcgacttcgccaccgacgaggcg
cttgcagcctcggccagcgaggaagcgccccggcgtggcaagagcaacggcaaccggcag
ggccgtccggcccgctccggccagccgggcgagcgtcacaacgcaggcggccagcataag
cagggcggcgatcggcgcgcggccaattcggccggcgaggccaagcgcgacggcgccaac
agagccaagcggcggcgcggcactggccagcgcggacgccctcaggcggccacggcctga
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