Aureimonas altamirensis: LUX29_15360
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Entry
LUX29_15360 CDS
T07762
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aalm
Aureimonas altamirensis
Pathway
aalm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LUX29_15360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalm03019
]
LUX29_15360
03009 Ribosome biogenesis [BR:
aalm03009
]
LUX29_15360
Enzymes [BR:
aalm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LUX29_15360
Messenger RNA biogenesis [BR:
aalm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LUX29_15360
Ribosome biogenesis [BR:
aalm03009
]
Prokaryotic type
rRNA processing factors
LUX29_15360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
UHD44422
LinkDB
All DBs
Position
3182781..3185540
Genome browser
AA seq
919 aa
AA seq
DB search
MANKMLIDASHPEETRVVVVRGNRIEEFDFESEHKKQLKGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRQALIEEELARISEDDDADEPRPEPKSGAKRPRRS
RKAAQAADVEGEDSVSEPVASDTPEAAAAEEAEPAKKAPPRRRRTTRKKAEPEAESAEAA
EAVEAVASPEEAEPARADSAERDTEEAPVEADSEDERPVPEQIGSEDAMEEVPERHRTQR
KQYKIQEVIKRRQILLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITN
VTDRKRLKEVVRDLEVPRGMGIILRTAGANRTKAEVKRDYEYLMRLWENVRTLTLASTAP
ALVYEEGNLIKRSIRDLYNKDIDQILVAGDTGYREAKDFMRMLMPSQAKVVQRYQDPTPI
FARQGIEAQLDKMLQPSVTLRSGGYIIINQTEALVAIDVNSGRSTREHSVEDTALQTNLE
AAEEVARQLRLRDLAGLIVIDFIDMEEKRNNRAVEKRLKDCLKDDRARIQIGTISHFGLM
EMSRQRIRASVLESTMQVCPTCGGNGFIRSASSMALHVLRSIEEHILKHGTHNVIVKVPT
ATALYILNEKRNTLDELERNHGLHISIQAEEGHGHAHVAIENGAEVPRKIGVEVVQPQTV
EPVDEDILDEETPDAPDAADAPEPTEARDTSEEPRRRKRRRRRRRGEGDQAEGNARADDS
GEDDAADEGDEDEVASDASAETPSDDDNSGDRKRRRRGRRGGRRGRDAAADDSAAEGSTA
DGAEAGDAESNDAEAGDRSEDPIEDTVTLAAEVESGVIVAENADEPFARASDDDAAPDAI
DEDTVTAAEEAAVEDINGAVSPQDVASAPADAIETAEEEDAEPAAPAELAKPVVTNNGET
TEAAEKPKRTGWWARRSFF
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaaatgctgatcgatgcgtcccacccggaagagacgcgcgtcgtcgtcgtt
cgcggtaaccgcattgaggaattcgacttcgaatccgaacacaagaagcagctcaagggt
aacatctaccttgccaaggtgacgcgcgttgagccgtcgctgcaggcagccttcgtcgag
tatggtggcaaccgccacggcttcctcgccttcagcgagatccatcccgactactaccag
atccccgtggccgaccgtcaggcgctgatcgaagaggaactggcccgcatctccgaagac
gacgatgcggacgagccccggcccgagccgaagtcgggcgcaaagcgtcctcgccgcagc
cgcaaggccgcgcaggcagccgacgtcgagggagaggacagcgtctccgagcctgtcgct
tccgacactccggaggcggccgccgccgaagaggccgagcctgccaagaaggcgccgccg
cgccgccgccgcacgacccgcaagaaggccgagccggaagccgagagcgccgaagctgcg
gaagccgtcgaagccgttgcctcccccgaggaagcagagcctgcacgagccgattcggcc
gagcgcgataccgaggaagcccccgtcgaggccgacagcgaggacgagcgccccgtgccc
gagcagatcgggtcggaagacgcgatggaggaagtcccggagcgccatcgcacgcagcgc
aagcagtacaagatccaggaagtcatcaagcgccgccagattttgctggtgcaggtcgtc
aaggaagagcgtggcaacaagggcgccgcgctgaccacctacctgtcgctggccggccgc
tactccgtcctgatgccgaacacggcgcgcggcggcggcatttcccgcaagattaccaat
gtcacggatcgcaagcgcctcaaggaggtcgtccgcgacctggaggtgccgcgtggcatg
ggcatcatcctgcgcacggccggggccaaccgcaccaaggccgaggttaagcgcgactac
gaatatctgatgcgcctgtgggagaatgtccgcacgctcaccctcgcctcgaccgcaccg
gccctggtgtacgaggaaggcaacctcatcaagcgctcgatccgcgatctctataacaag
gatatcgaccagatcctcgttgccggcgataccggctaccgcgaggcgaaggacttcatg
cgcatgctgatgccgagccaggcaaaggtcgttcagcgctaccaggaccccacgcccatc
ttcgcgcggcaaggcatcgaagcgcagctcgacaagatgctgcagcccagcgtgaccctg
cggtccggcggttacatcatcatcaaccagaccgaggcgctggttgccatcgacgtcaat
tccgggcgctcgacgcgcgagcattcggtcgaggatactgccctgcagaccaacctcgag
gcggccgaggaagtggcccgccaattgcgcctgcgcgatcttgccggcctcatcgtgatc
gatttcatcgacatggaagagaagcgcaacaaccgcgccgtcgaaaagcgcctcaaggat
tgcctgaaggacgaccgggcccgaatccagatcggcaccatctcgcatttcggcctcatg
gaaatgagccgccagcgcatccgcgccagcgtgcttgaatccacgatgcaggtctgcccc
acatgcggcggcaacggcttcatccgctcggcttcgtcgatggcgctgcatgtcctgcgc
agcatcgaggagcatatcctcaagcacggcacgcacaatgtgatcgtgaaggtgccgacc
gccaccgcgctctacatcctgaacgaaaagcgcaacacgctggacgaactcgagcgcaac
cacggcctgcatatcagcatccaggccgaggaagggcacggtcacgcccacgtcgccatc
gagaacggcgcggaagtgccgcgcaagatcggcgtcgaggtcgtgcagccgcagaccgtc
gagcccgtggacgaagatatcctcgacgaggaaacccctgatgctccggatgctgcagat
gctccggagccgaccgaggcccgtgacaccagcgaagagccgcgccgccgcaagcgtcgg
cgtcggcgtcggcgcggtgaaggcgaccaggccgagggcaatgcccgcgccgacgattcc
ggcgaagacgatgccgccgacgaaggcgatgaagacgaggttgcgtccgacgcaagcgcc
gagacgccatccgatgatgataatagtggcgaccgcaagcgccgccgtcgtggccgccgg
ggcggtcgtcgtggccgggacgccgcagcagacgattccgcagcggaaggttctacagcg
gatggtgccgaggcaggcgatgccgagtcgaacgatgccgaggcgggcgaccggtcggag
gatccgatcgaggacacggtcactttggccgccgaggtcgagagtggcgtgatcgtggcc
gagaatgccgacgagccgtttgcccgggcatccgacgacgatgcggcgcctgacgccatc
gacgaagacactgtcaccgcggccgaggaagccgcggtggaggacatcaacggcgcggtg
tcgccgcaggatgtcgcgtcggctccggcagacgccatcgagaccgccgaagaagaagac
gctgagccggcagcccctgcagagctggccaagcccgtcgtgaccaataatggcgagacg
acagaggcggccgaaaagccgaagcggacgggctggtgggcgcgtcgcagcttcttctga
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